RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 KNOP1Q1ED39 458 aaKnown RBP10.15□□□□□ -0.78
CSMD1-217ENST00000602723 OLFML2BQ68BL8 750 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 AGGF1Q8N302 714 aaeCLIP10.15□□□□□ -0.782e-8■■■■■ 37.2
CSMD1-217ENST00000602723 ZNF507Q8TCN5 953 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 TSSK1BQ9BXA7 367 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 AIPL1Q9NZN9 384 aa10.15□□□□□ -0.78
CSMD1-217ENST00000602723 KRT75O95678 551 aa10.15□□□□□ -0.79
CSMD1-217ENST00000602723 PRELPP51888 382 aa10.15□□□□□ -0.79
CSMD1-217ENST00000602723 GJC2Q5T442 439 aaPredicted RBP10.15□□□□□ -0.79
CSMD1-217ENST00000602723 IL17RAQ96F46 866 aa10.15□□□□□ -0.79
CSMD1-217ENST00000602723 ATG3Q9NT62 314 aa10.15□□□□□ -0.79
CSMD1-217ENST00000602723 USP17L5A8MUK1 530 aa10.15□□□□□ -0.79
CSMD1-217ENST00000602723 HNRNPRO43390 633 aaKnown RBP10.15□□□□□ -0.79
CSMD1-217ENST00000602723 ZNF394Q53GI3 561 aa10.15□□□□□ -0.79
CSMD1-217ENST00000602723 THEM5Q8N1Q8 247 aa10.15□□□□□ -0.79
CSMD1-217ENST00000602723 AFG1LQ8WV93 481 aa10.15□□□□□ -0.79
CSMD1-217ENST00000602723 PHF21AQ96BD5 680 aa10.15□□□□□ -0.79
CSMD1-217ENST00000602723 RNPC3Q96LT9 517 aaKnown RBP10.15□□□□□ -0.79
CSMD1-217ENST00000602723 GID8Q9NWU2 228 aa10.15□□□□□ -0.79
CSMD1-217ENST00000602723 HSPBP1Q9NZL4 362 aa10.15□□□□□ -0.79
CSMD1-217ENST00000602723 LRRC36Q1X8D7 754 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 ZNF568Q3ZCX4 644 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 USP15Q9Y4E8 981 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-217ENST00000602723 DDX5P17844 614 aaKnown RBP10.14□□□□□ -0.79
CSMD1-217ENST00000602723 CCDC15Q0P6D6 951 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 MED21Q13503 144 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 MTMR1Q13613 665 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 ANO4Q32M45 955 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 MDH1BQ5I0G3 518 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 SLC10A5Q5PT55 438 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 ADGRG1Q9Y653 693 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 CDC42BPAQ5VT25 1732 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 EIF3HO15372 352 aaKnown RBP eCLIP10.14□□□□□ -0.79
CSMD1-217ENST00000602723 KRT72Q14CN4 511 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 TMC4Q7Z404 712 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 FAM160B2Q86V87 743 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 DTX3LQ8TDB6 740 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 BCS1LQ9Y276 419 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 ATP10AO60312 1499 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 MAGI2Q86UL8 1455 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 FOXP2O15409 715 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 VAMP7P51809 220 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 HSPA2P54652 639 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 TSPY1Q01534 308 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 EFHC2Q5JST6 749 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 FAM102AQ5T9C2 384 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-217ENST00000602723 SCFD1Q8WVM8 642 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 FAM167AQ96KS9 214 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 GOLGA8RI6L899 631 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 DFFAO00273 331 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 NEMP1O14524 444 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 SERPINB1P30740 379 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 CCDC142Q17RM4 750 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 TAS2R42Q7RTR8 314 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 GIMAP8Q8ND71 665 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-217ENST00000602723 RFFLQ8WZ73 363 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 USP21Q9UK80 565 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 SMG5Q9UPR3 1016 aaKnown RBP10.14□□□□□ -0.79
CSMD1-217ENST00000602723 ANKARQ7Z5J8 1434 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 KRT87PA6NCN2 255 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 C16orf96A6NNT2 1141 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 C5orf58C9J3I9 102 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 CDH6P55285 790 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 AP3B2Q13367 1082 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 P3H1Q32P28 736 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 RC3H1Q5TC82 1133 aaKnown RBP10.14□□□□□ -0.79
CSMD1-217ENST00000602723 SYDE1Q6ZW31 735 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-217ENST00000602723 SRLQ86TD4 932 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 NLRP10Q86W26 655 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 TMA16Q96EY4 203 aaKnown RBP10.14□□□□□ -0.79
CSMD1-217ENST00000602723 SELENONQ9NZV5 590 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 NEDD4P46934 1319 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 POTEFA5A3E0 1075 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 ZNF189O75820 626 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-217ENST00000602723 POTEIP0CG38 1075 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 PSMD7P51665 324 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 DEFA1P59665 94 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 DEFA3P59666 94 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 POTEGQ6S5H5 508 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 POTEEQ6S8J3 1075 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 C16orf89Q6UX73 402 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 STAG2Q8N3U4 1231 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 ABCB11O95342 1321 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 LOC102724428A0A0B4J2F2 783 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 MAFGO15525 162 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 PRPF4O43172 522 aaKnown RBP eCLIP10.14□□□□□ -0.79
CSMD1-217ENST00000602723 CHN1P15882 459 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 GPC3P51654 580 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 SIK1P57059 783 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 ELMSAN1Q6PJG2 1045 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 NDFIP2Q9NV92 336 aa10.14□□□□□ -0.79
CSMD1-217ENST00000602723 PRDM15P57071 1507 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 POTECB2RU33 542 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 ORC4O43929 436 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 APBA3O96018 575 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 SUPT20HL1Q3ZLR7 823 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 MFN1Q8IWA4 741 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 PPHLN1Q8NEY8 458 aaKnown RBP10.13□□□□□ -0.79
CSMD1-217ENST00000602723 PLEKHF1Q96S99 279 aa10.13□□□□□ -0.79
CSMD1-217ENST00000602723 TRIM54Q9BYV2 358 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms