RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 MARCH5Q9NX47 278 aa28.74■■■□□ 2.19
PNKP-216ENST00000601816 KLK14Q9P0G3 267 aa28.74■■■□□ 2.19
PNKP-216ENST00000601816 VWA3AA6NCI4 1184 aa28.73■■■□□ 2.19
PNKP-216ENST00000601816 CUL4AQ13619 759 aa28.73■■■□□ 2.19
PNKP-216ENST00000601816 ARL6IP4Q66PJ3 421 aaKnown RBP28.73■■■□□ 2.19
PNKP-216ENST00000601816 PHF7Q9BWX1 381 aaPredicted RBP28.73■■■□□ 2.19
PNKP-216ENST00000601816 FAM86C2PA6NEL3 165 aa28.72■■■□□ 2.19
PNKP-216ENST00000601816 SSBP05455 408 aaKnown RBP eCLIP28.72■■■□□ 2.19
PNKP-216ENST00000601816 GRIK3Q13003 919 aa28.72■■■□□ 2.19
PNKP-216ENST00000601816 CBX2Q14781 532 aaPredicted RBP28.72■■■□□ 2.19
PNKP-216ENST00000601816 KCNK18Q7Z418 384 aa28.72■■■□□ 2.19
PNKP-216ENST00000601816 GSTCDQ8NEC7 633 aa28.72■■■□□ 2.19
PNKP-216ENST00000601816 LRFN3Q9BTN0 628 aa28.72■■■□□ 2.19
PNKP-216ENST00000601816 RUSC1Q9BVN2 902 aa28.72■■■□□ 2.19
PNKP-216ENST00000601816 USP20Q9Y2K6 914 aa28.72■■■□□ 2.19
PNKP-216ENST00000601816 GPR37L1O60883 481 aa28.71■■■□□ 2.19
PNKP-216ENST00000601816 EDN1P05305 212 aa28.71■■■□□ 2.19
PNKP-216ENST00000601816 PEX3P56589 373 aa28.71■■■□□ 2.19
PNKP-216ENST00000601816 HYIQ5T013 277 aa28.71■■■□□ 2.19
PNKP-216ENST00000601816 BRAPQ7Z569 592 aa28.71■■■□□ 2.19
PNKP-216ENST00000601816 DRC1Q96MC2 740 aa28.71■■■□□ 2.19
PNKP-216ENST00000601816 HERC2P3Q9BVR0 1158 aa28.71■■■□□ 2.19
PNKP-216ENST00000601816 COLEC11Q9BWP8 271 aa28.71■■■□□ 2.19
PNKP-216ENST00000601816 EMILIN2Q9BXX0 1053 aa28.71■■■□□ 2.19
PNKP-216ENST00000601816 C11orf16Q9NQ32 467 aa28.71■■■□□ 2.19
PNKP-216ENST00000601816 MRPL17Q9NRX2 175 aaKnown RBP28.71■■■□□ 2.19
PNKP-216ENST00000601816 DZANK1Q9NVP4 752 aa28.71■■■□□ 2.19
PNKP-216ENST00000601816 C5orf42Q9H799 3197 aa28.7■■■□□ 2.19
PNKP-216ENST00000601816 CCDC169A6NNP5 214 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 LOC730098B7Z3J9 87 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 HIP1RO75146 1068 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 SOD2P04179 222 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 URODP06132 367 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 DMP1Q13316 513 aaPredicted RBP28.7■■■□□ 2.18
PNKP-216ENST00000601816 EEF1DP3Q658K8 133 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 RINT1Q6NUQ1 792 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 PPFIBP1Q86W92 1011 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 RNF135Q8IUD6 432 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 DAW1Q8N136 415 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 KCTD17Q8N5Z5 321 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 CDK5RAP3Q96JB5 506 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 BACH2Q9BYV9 841 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 NT5C3AQ9H0P0 336 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 SNTG2Q9NY99 539 aa28.7■■■□□ 2.18
PNKP-216ENST00000601816 TDRD15B5MCY1 1934 aaKnown RBP28.69■■■□□ 2.18
PNKP-216ENST00000601816 K7ERI5 159 aa28.69■■■□□ 2.18
PNKP-216ENST00000601816 EPCAMP16422 314 aa28.69■■■□□ 2.18
PNKP-216ENST00000601816 NPTX2P47972 431 aa28.69■■■□□ 2.18
PNKP-216ENST00000601816 DCAF4L1Q3SXM0 396 aa28.69■■■□□ 2.18
PNKP-216ENST00000601816 CES5AQ6NT32 575 aa28.69■■■□□ 2.18
PNKP-216ENST00000601816 C1orf186Q6ZWK4 172 aa28.69■■■□□ 2.18
PNKP-216ENST00000601816 SLC22A17Q8WUG5 538 aa28.69■■■□□ 2.18
PNKP-216ENST00000601816 RPGRIP1Q96KN7 1286 aa28.69■■■□□ 2.18
PNKP-216ENST00000601816 PNMA5Q96PV4 448 aa28.69■■■□□ 2.18
PNKP-216ENST00000601816 DAXXQ9UER7 740 aaPredicted RBP28.69■■■□□ 2.18
PNKP-216ENST00000601816 PHLPP2Q6ZVD8 1323 aa28.69■■■□□ 2.18
PNKP-216ENST00000601816 VPS37CA5D8V6 355 aaPredicted RBP28.68■■■□□ 2.18
PNKP-216ENST00000601816 RECQL4O94761 1208 aa28.68■■■□□ 2.18
PNKP-216ENST00000601816 BMP15O95972 392 aa28.68■■■□□ 2.18
PNKP-216ENST00000601816 ITIH3Q06033 890 aa28.68■■■□□ 2.18
PNKP-216ENST00000601816 NT5DC1Q5TFE4 455 aa28.68■■■□□ 2.18
PNKP-216ENST00000601816 ATF7IP2Q5U623 682 aa28.68■■■□□ 2.18
PNKP-216ENST00000601816 APBB1IPQ7Z5R6 666 aaPredicted RBP28.68■■■□□ 2.18
PNKP-216ENST00000601816 KLHL5Q96PQ7 755 aa28.68■■■□□ 2.18
PNKP-216ENST00000601816 PLIN2Q99541 437 aa28.68■■■□□ 2.18
PNKP-216ENST00000601816 TIPINQ9BVW5 301 aa28.68■■■□□ 2.18
PNKP-216ENST00000601816 ADAM7Q9H2U9 754 aa28.68■■■□□ 2.18
PNKP-216ENST00000601816 MUTYHQ9UIF7 546 aa28.68■■■□□ 2.18
PNKP-216ENST00000601816 SSX2IPQ9Y2D8 614 aa28.68■■■□□ 2.18
PNKP-216ENST00000601816 F8W810 466 aa28.67■■■□□ 2.18
PNKP-216ENST00000601816 C2CD2LO14523 706 aa28.67■■■□□ 2.18
PNKP-216ENST00000601816 LILRB3O75022 631 aa28.67■■■□□ 2.18
PNKP-216ENST00000601816 CNPP09543 421 aaKnown RBP28.67■■■□□ 2.18
PNKP-216ENST00000601816 PDCP20941 246 aa28.67■■■□□ 2.18
PNKP-216ENST00000601816 GUCY2CP25092 1073 aa28.67■■■□□ 2.18
PNKP-216ENST00000601816 KLRC2P26717 231 aa28.67■■■□□ 2.18
PNKP-216ENST00000601816 MAPK7Q13164 816 aa28.67■■■□□ 2.18
PNKP-216ENST00000601816 RNF168Q8IYW5 571 aaPredicted RBP28.67■■■□□ 2.18
PNKP-216ENST00000601816 AK8Q96MA6 479 aa28.67■■■□□ 2.18
PNKP-216ENST00000601816 C17orf75Q9HAS0 396 aa28.67■■■□□ 2.18
PNKP-216ENST00000601816 KMT5AQ9NQR1 393 aa28.67■■■□□ 2.18
PNKP-216ENST00000601816 EFEMP2O95967 443 aa28.66■■■□□ 2.18
PNKP-216ENST00000601816 GLUD2P49448 558 aa28.66■■■□□ 2.18
PNKP-216ENST00000601816 HERC4Q5GLZ8 1057 aaPredicted RBP28.66■■■□□ 2.18
PNKP-216ENST00000601816 RARS2Q5T160 578 aaKnown RBP28.66■■■□□ 2.18
PNKP-216ENST00000601816 TAS1R1Q7RTX1 841 aa28.66■■■□□ 2.18
PNKP-216ENST00000601816 CABP7Q86V35 215 aa28.66■■■□□ 2.18
PNKP-216ENST00000601816 SYT2Q8N9I0 419 aaPredicted RBP28.66■■■□□ 2.18
PNKP-216ENST00000601816 NECTIN4Q96NY8 510 aa28.66■■■□□ 2.18
PNKP-216ENST00000601816 TMEM134Q9H6X4 195 aa28.66■■■□□ 2.18
PNKP-216ENST00000601816 TUSC3Q13454 348 aa28.65■■■□□ 2.18
PNKP-216ENST00000601816 TMEM119Q4V9L6 283 aa28.65■■■□□ 2.18
PNKP-216ENST00000601816 KIAA1841Q6NSI8 718 aa28.65■■■□□ 2.18
PNKP-216ENST00000601816 FUT10Q6P4F1 479 aa28.65■■■□□ 2.18
PNKP-216ENST00000601816 C12orf76Q8N812 135 aaPredicted RBP28.65■■■□□ 2.18
PNKP-216ENST00000601816 ARHGAP28Q9P2N2 729 aa28.65■■■□□ 2.18
PNKP-216ENST00000601816 CDH22Q9UJ99 828 aa28.65■■■□□ 2.18
PNKP-216ENST00000601816 TNFSF13BQ9Y275 285 aa28.65■■■□□ 2.18
PNKP-216ENST00000601816 GDAQ9Y2T3 454 aa28.65■■■□□ 2.18
PNKP-216ENST00000601816 RBM19Q9Y4C8 960 aaKnown RBP28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms