RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 C4orf19Q8IY42 314 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 TRIM22Q8IYM9 498 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 PJA1Q8NG27 643 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 FAM20AQ96MK3 541 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 HINFPQ9BQA5 517 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 SLKQ9H2G2 1235 aaPredicted RBP18.7■□□□□ 0.58
USE1-208ENST00000600970 KCNMB3Q9NPA1 279 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.7■□□□□ 0.58
USE1-208ENST00000600970 FNIP2Q9P278 1114 aa18.7■□□□□ 0.58
USE1-208ENST00000600970 POTEMA6NI47 508 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 YWHABP31946 246 aaKnown RBP18.69■□□□□ 0.58
USE1-208ENST00000600970 PUM1Q14671 1186 aaKnown RBP eCLIP18.69■□□□□ 0.58
USE1-208ENST00000600970 USP41Q3LFD5 358 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 FUT10Q6P4F1 479 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 NOTUMQ6P988 496 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 GPR65Q8IYL9 337 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 DCLK2Q8N568 766 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 RUBCNQ92622 972 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 CCDC51Q96ER9 411 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 LXNQ9BS40 222 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 APOL6Q9BWW8 343 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 FOXQ1Q9C009 403 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 CSRNP2Q9H175 543 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 GIT1Q9Y2X7 761 aa18.69■□□□□ 0.58
USE1-208ENST00000600970 PATJQ8NI35 1801 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 ZBTB39O15060 712 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 LRRN2O75325 713 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 DEXIO95424 95 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 RPL17P18621 184 aaKnown RBP18.68■□□□□ 0.58
USE1-208ENST00000600970 STARD6P59095 220 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 PTENP60484 403 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 PCBP1Q15365 356 aaKnown RBP eCLIP18.68■□□□□ 0.58
USE1-208ENST00000600970 EPHA7Q15375 998 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 OTUD6AQ7L8S5 288 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 KRT25Q7Z3Z0 450 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 MAML2Q8IZL2 1156 aaPredicted RBP18.68■□□□□ 0.58
USE1-208ENST00000600970 GSTCDQ8NEC7 633 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 AIFM3Q96NN9 605 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 MTRQ99707 1265 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 RPP25Q9BUL9 199 aaKnown RBP18.68■□□□□ 0.58
USE1-208ENST00000600970 NXF3Q9H4D5 531 aaKnown RBP18.68■□□□□ 0.58
USE1-208ENST00000600970 RGL1Q9NZL6 768 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 ADAM28Q9UKQ2 775 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 COL4A3Q01955 1670 aa18.68■□□□□ 0.58
USE1-208ENST00000600970 DOCK6Q96HP0 2047 aa18.67■□□□□ 0.58
USE1-208ENST00000600970 ZMYND10O75800 440 aa18.67■□□□□ 0.58
USE1-208ENST00000600970 GPC5P78333 572 aa18.67■□□□□ 0.58
USE1-208ENST00000600970 XKR9Q5GH70 373 aa18.67■□□□□ 0.58
USE1-208ENST00000600970 GALNT17Q6IS24 598 aa18.67■□□□□ 0.58
USE1-208ENST00000600970 SUMF1Q8NBK3 374 aa18.67■□□□□ 0.58
USE1-208ENST00000600970 RABGGTAQ92696 567 aa18.67■□□□□ 0.58
USE1-208ENST00000600970 FGF14Q92915 247 aa18.67■□□□□ 0.58
USE1-208ENST00000600970 XPNPEP1Q9NQW7 623 aa18.67■□□□□ 0.58
USE1-208ENST00000600970 DLL3Q9NYJ7 618 aa18.67■□□□□ 0.58
USE1-208ENST00000600970 ZFP37Q9Y6Q3 630 aaPredicted RBP18.67■□□□□ 0.58
USE1-208ENST00000600970 ZNF292O60281 2723 aa18.67■□□□□ 0.58
USE1-208ENST00000600970 FRYLO94915 3013 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 INO80B-WBP1J3KQ70 363 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 FSHRP23945 695 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 AKAP5P24588 427 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 PSMA5P28066 241 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 CREMQ03060 361 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 NCBP1Q09161 790 aaKnown RBP18.66■□□□□ 0.58
USE1-208ENST00000600970 TOB2Q14106 344 aaPredicted RBP18.66■□□□□ 0.58
USE1-208ENST00000600970 MXD4Q14582 209 aaPredicted RBP18.66■□□□□ 0.58
USE1-208ENST00000600970 AMHR2Q16671 573 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 PPP4R3AQ6IN85 833 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 PRSS55Q6UWB4 352 aaPredicted RBP18.66■□□□□ 0.58
USE1-208ENST00000600970 PARM1Q6UWI2 310 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 GRASPQ7Z6J2 395 aaPredicted RBP18.66■□□□□ 0.58
USE1-208ENST00000600970 IFNLR1Q8IU57 520 aaPredicted RBP18.66■□□□□ 0.58
USE1-208ENST00000600970 FAM177A1Q8N128 213 aaPredicted RBP18.66■□□□□ 0.58
USE1-208ENST00000600970 HAS1Q92839 578 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 DYDC2Q96IM9 177 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 SHDQ96IW2 340 aa18.66■□□□□ 0.58
USE1-208ENST00000600970 TRIM6Q9C030 488 aaPredicted RBP18.66■□□□□ 0.58
USE1-208ENST00000600970 CACNA1AO00555 2505 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 ARF4P18085 180 aaPredicted RBP18.65■□□□□ 0.58
USE1-208ENST00000600970 MBTD1Q05BQ5 628 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 GRIK3Q13003 919 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 SNW1Q13573 536 aaKnown RBP18.65■□□□□ 0.58
USE1-208ENST00000600970 TFDP1Q14186 410 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 CTTNQ14247 550 aaKnown RBP18.65■□□□□ 0.58
USE1-208ENST00000600970 NCAPH2Q6IBW4 605 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 NEK8Q86SG6 692 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 HACE1Q8IYU2 909 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 ZSWIM4Q9H7M6 989 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 KLK14Q9P0G3 267 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 CACNG4Q9UBN1 327 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 FBXW11Q9UKB1 542 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 CDH7Q9ULB5 785 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 KCNJ14Q9UNX9 436 aa18.65■□□□□ 0.58
USE1-208ENST00000600970 KANSL1LA0AUZ9 987 aa18.64■□□□□ 0.57
USE1-208ENST00000600970 CPLX1O14810 134 aa18.64■□□□□ 0.57
USE1-208ENST00000600970 TBX3O15119 743 aa18.64■□□□□ 0.57
USE1-208ENST00000600970 KINO60870 393 aaKnown RBP18.64■□□□□ 0.57
USE1-208ENST00000600970 TADA2AO75478 443 aa18.64■□□□□ 0.57
USE1-208ENST00000600970 GCFC2P16383 781 aaKnown RBP18.64■□□□□ 0.57
USE1-208ENST00000600970 NTHL1P78549 312 aa18.64■□□□□ 0.57
USE1-208ENST00000600970 CYP4A11Q02928 519 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms