RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 KPNA6O60684 536 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 IQCF3P0C7M6 154 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 ZNF200P98182 395 aaPredicted RBP16.49■□□□□ 0.23
VRK3-218ENST00000600031 MBTD1Q05BQ5 628 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 POU5F1BQ06416 359 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 SNRNP35Q16560 246 aaKnown RBP16.49■□□□□ 0.23
VRK3-218ENST00000600031 CXCL17Q6UXB2 119 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 INTS8Q75QN2 995 aaKnown RBP16.49■□□□□ 0.23
VRK3-218ENST00000600031 CNGA4Q8IV77 575 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 FZD8Q9H461 694 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 AGPAT5Q9NUQ2 364 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 HDAC6Q9UBN7 1215 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 CAPN11Q9UMQ6 739 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 TRIP12Q14669 1992 aaPredicted RBP16.49■□□□□ 0.23
VRK3-218ENST00000600031 INO80B-WBP1J3KQ70 363 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 CSDE1O75534 798 aaKnown RBP16.49■□□□□ 0.23
VRK3-218ENST00000600031 KRT13P13646 458 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 KRT9P35527 623 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 VAMP7P51809 220 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 TUBB2AQ13885 445 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 FIGNQ5HY92 759 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 ZPBP2Q6X784 338 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 GPD1LQ8N335 351 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 FAM213AQ9BRX8 229 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 MTG1Q9BT17 334 aaPredicted RBP16.49■□□□□ 0.23
VRK3-218ENST00000600031 TUBB2BQ9BVA1 445 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 MRPL4Q9BYD3 311 aaKnown RBP16.49■□□□□ 0.23
VRK3-218ENST00000600031 NFKBIZQ9BYH8 718 aa16.49■□□□□ 0.23
VRK3-218ENST00000600031 INO80BQ9C086 356 aaPredicted RBP16.49■□□□□ 0.23
VRK3-218ENST00000600031 FECHP22830 423 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 PHKA2P46019 1235 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 GPC3P51654 580 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 APBA1Q02410 837 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 CBWD6Q4V339 395 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 CBWD3Q5JTY5 395 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 CBWD5Q5RIA9 395 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 C1orf220Q5T0J3 134 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 SLFN12LQ6IEE8 588 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 RUFY4Q6ZNE9 571 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 RSRC2Q7L4I2 434 aaKnown RBP16.48■□□□□ 0.23
VRK3-218ENST00000600031 RABGGTAQ92696 567 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 ACO2Q99798 780 aaKnown RBP16.48■□□□□ 0.23
VRK3-218ENST00000600031 LSM14BQ9BX40 385 aaKnown RBP16.48■□□□□ 0.23
VRK3-218ENST00000600031 FAM49AQ9H0Q0 323 aaPredicted RBP16.48■□□□□ 0.23
VRK3-218ENST00000600031 ANKFY1Q9P2R3 1169 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 AGO2Q9UKV8 859 aaKnown RBP16.48■□□□□ 0.23
VRK3-218ENST00000600031 ADGRG1Q9Y653 693 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 BRCA2P51587 3418 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 A0A0B4J269 797 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 ACKR2O00590 384 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 TREHO43280 583 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 B4GALT5O43286 388 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 CYP2C9P11712 490 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 FMO5P49326 533 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 NLRP11P59045 1033 aaKnown RBP16.48■□□□□ 0.23
VRK3-218ENST00000600031 ARHGEF6Q15052 776 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 IFNLR1Q8IU57 520 aaPredicted RBP16.48■□□□□ 0.23
VRK3-218ENST00000600031 KLHDC9Q8NEP7 349 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 ABHD10Q9NUJ1 306 aa16.48■□□□□ 0.23
VRK3-218ENST00000600031 DDX20Q9UHI6 824 aaKnown RBP16.48■□□□□ 0.23
VRK3-218ENST00000600031 LUC7L2Q9Y383 392 aaKnown RBP16.48■□□□□ 0.23
VRK3-218ENST00000600031 SMIM35A0A1B0GVV1 85 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 SOWAHDA6NJG2 315 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 EXTL3O43909 919 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 NOL4O94818 638 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 MYCNP04198 464 aaPredicted RBP16.47■□□□□ 0.23
VRK3-218ENST00000600031 SLC9A1P19634 815 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 HOXC8P31273 242 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 MATR3P43243 847 aaKnown RBP eCLIP16.47■□□□□ 0.23
VRK3-218ENST00000600031 MCCD1P59942 119 aaPredicted RBP16.47■□□□□ 0.23
VRK3-218ENST00000600031 PPP3CAQ08209 521 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 TMEM62Q0P6H9 643 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 TAF3Q5VWG9 929 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 DPY19L2P1Q6NXN4 242 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 C7orf31Q8N865 590 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 NEK11Q8NG66 645 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 NLRP7Q8WX94 980 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 GOLGA1Q92805 767 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 MFSD14AQ96MC6 490 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 DESI2Q9BSY9 194 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 SCN10AQ9Y5Y9 1956 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 DNAH12Q6ZR08 3092 aa16.47■□□□□ 0.23
VRK3-218ENST00000600031 A0A1W2PQJ5 194 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 C17orf102A2RUQ5 167 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 KIF5CO60282 957 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 ZEB2O60315 1214 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 TOM1L1O75674 476 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 INHAP05111 366 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 PLA2G4AP47712 749 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 ACOT2P49753 483 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 TUBB4BP68371 445 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 CYP24A1Q07973 514 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 PRPF4BQ13523 1007 aaKnown RBP16.46■□□□□ 0.23
VRK3-218ENST00000600031 KCNA10Q16322 511 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 EXOC3L4Q17RC7 722 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 ZBTB41Q5SVQ8 909 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 CCSAPQ6IQ19 270 aaPredicted RBP16.46■□□□□ 0.23
VRK3-218ENST00000600031 CRELD2Q6UXH1 353 aaPredicted RBP16.46■□□□□ 0.23
VRK3-218ENST00000600031 RAD9BQ6WBX8 426 aa16.46■□□□□ 0.23
VRK3-218ENST00000600031 CCDC127Q96BQ5 260 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms