RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 TDGQ13569 410 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 GNL2Q13823 731 aaKnown RBP15.22■□□□□ 0.03
IRF3-225ENST00000600022 EMC2Q15006 297 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 EPHA7Q15375 998 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 SAFBQ15424 915 aaKnown RBP eCLIP15.22■□□□□ 0.03
IRF3-225ENST00000600022 XKR9Q5GH70 373 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 KIAA0319Q5VV43 1072 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 NCAPH2Q6IBW4 605 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 PPP4R3AQ6IN85 833 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 SRGAP1Q7Z6B7 1085 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 NEK8Q86SG6 692 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 PSPC1Q8WXF1 523 aaKnown RBP15.22■□□□□ 0.03
IRF3-225ENST00000600022 FAM20AQ96MK3 541 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 FAM193BQ96PV7 902 aaPredicted RBP15.22■□□□□ 0.03
IRF3-225ENST00000600022 RPS6KC1Q96S38 1066 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 APOL6Q9BWW8 343 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 EMILIN2Q9BXX0 1053 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 MAN1C1Q9NR34 630 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 MRPL17Q9NRX2 175 aaKnown RBP15.22■□□□□ 0.03
IRF3-225ENST00000600022 C2orf16Q68DN1 1984 aa15.22■□□□□ 0.03
IRF3-225ENST00000600022 DMXL1Q9Y485 3027 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 CCDC195A0A1B0GUA6 201 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 CCDC194A0A1B0GVG4 234 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 SPDYE4A6NLX3 237 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 SOD2P04179 222 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 ITGA4P13612 1032 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 MLH1P40692 756 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 NBL1P41271 181 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 SCNN1GP51170 649 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 CLCN5P51795 746 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 KRT85P78386 507 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 GUCY1B3Q02153 619 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 NR5A1Q13285 461 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 AMHR2Q16671 573 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 GALNT17Q6IS24 598 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 CCDC149Q6ZUS6 474 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 PPFIBP1Q86W92 1011 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 PALB2Q86YC2 1186 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 TPH2Q8IWU9 490 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 C4orf19Q8IY42 314 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 RNF168Q8IYW5 571 aaPredicted RBP15.21■□□□□ 0.03
IRF3-225ENST00000600022 SIX5Q8N196 739 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 GSTCDQ8NEC7 633 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 ASAP3Q8TDY4 903 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 MYADMQ96S97 322 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 JPH2Q9BR39 696 aaPredicted RBP15.21■□□□□ 0.03
IRF3-225ENST00000600022 TMEM175Q9BSA9 504 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 CXCL16Q9H2A7 254 aa15.21■□□□□ 0.03
IRF3-225ENST00000600022 DENND4AQ7Z401 1863 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 ZNF292O60281 2723 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 KRBA1A5PL33 1030 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 B4GALT5O43286 388 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 CFHP08603 1231 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 RPL17P18621 184 aaKnown RBP15.2■□□□□ 0.02
IRF3-225ENST00000600022 AKAP5P24588 427 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 RFC5P40937 340 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 NUBP1P53384 320 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 PTENP60484 403 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 DSC1Q08554 894 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
IRF3-225ENST00000600022 ATL3Q6DD88 541 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
IRF3-225ENST00000600022 OTOP3Q7RTS5 596 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 BRAPQ7Z569 592 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 GLYCTKQ8IVS8 523 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 ZNF707Q96C28 371 aaPredicted RBP15.2■□□□□ 0.02
IRF3-225ENST00000600022 ACSF2Q96CM8 615 aaPredicted RBP15.2■□□□□ 0.02
IRF3-225ENST00000600022 ZNF396Q96N95 335 aaPredicted RBP15.2■□□□□ 0.02
IRF3-225ENST00000600022 GPR62Q9BZJ7 368 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 IRF2BPLQ9H1B7 796 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 NXF3Q9H4D5 531 aaKnown RBP15.2■□□□□ 0.02
IRF3-225ENST00000600022 KLK14Q9P0G3 267 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 KANSL3Q9P2N6 904 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 CFAP45Q9UL16 551 aa15.2■□□□□ 0.02
IRF3-225ENST00000600022 CNTNAP2Q9UHC6 1331 aa15.19■□□□□ 0.02
IRF3-225ENST00000600022 FAM186AA6NE01 2351 aa15.19■□□□□ 0.02
IRF3-225ENST00000600022 AOC1P19801 751 aa15.19■□□□□ 0.02
IRF3-225ENST00000600022 U2AF2P26368 475 aaKnown RBP eCLIP15.19■□□□□ 0.021e-7■■■■■ 32.6
IRF3-225ENST00000600022 RSPH1Q8WYR4 309 aa15.19■□□□□ 0.02
IRF3-225ENST00000600022 PAAF1Q9BRP4 392 aa15.19■□□□□ 0.02
IRF3-225ENST00000600022 HERC2P3Q9BVR0 1158 aa15.19■□□□□ 0.02
IRF3-225ENST00000600022 SCAND2PQ9GZW5 306 aaPredicted RBP15.19■□□□□ 0.02
IRF3-225ENST00000600022 FOXP1Q9H334 677 aaPredicted RBP15.19■□□□□ 0.02
IRF3-225ENST00000600022 RXFP1Q9HBX9 757 aa15.19■□□□□ 0.02
IRF3-225ENST00000600022 DUSP12Q9UNI6 340 aa15.19■□□□□ 0.02
IRF3-225ENST00000600022 USP20Q9Y2K6 914 aa15.19■□□□□ 0.02
IRF3-225ENST00000600022 GVINP1Q7Z2Y8 2422 aa15.18■□□□□ 0.02
IRF3-225ENST00000600022 TTLL13PA6NNM8 815 aa15.18■□□□□ 0.02
IRF3-225ENST00000600022 INO80B-WBP1J3KQ70 363 aa15.18■□□□□ 0.02
IRF3-225ENST00000600022 INPPL1O15357 1258 aa15.18■□□□□ 0.02
IRF3-225ENST00000600022 TRAK2O60296 914 aa15.18■□□□□ 0.02
IRF3-225ENST00000600022 MARCH6O60337 910 aa15.18■□□□□ 0.02
IRF3-225ENST00000600022 MBD3O95983 291 aa15.18■□□□□ 0.02
IRF3-225ENST00000600022 URODP06132 367 aa15.18■□□□□ 0.02
IRF3-225ENST00000600022 ARF4P18085 180 aaPredicted RBP15.18■□□□□ 0.02
IRF3-225ENST00000600022 GLRA2P23416 452 aa15.18■□□□□ 0.02
IRF3-225ENST00000600022 IGFBP6P24592 240 aaPredicted RBP15.18■□□□□ 0.02
IRF3-225ENST00000600022 GBP2P32456 591 aaPredicted RBP15.18■□□□□ 0.02
IRF3-225ENST00000600022 ARL2P36404 184 aa15.18■□□□□ 0.02
IRF3-225ENST00000600022 MBTD1Q05BQ5 628 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms