RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 C2CD2LO14523 706 aa20.73■□□□□ 0.91
PNKP-213ENST00000599543 NPTXRO95502 500 aa20.73■□□□□ 0.91
PNKP-213ENST00000599543 CLCN4P51793 760 aa20.73■□□□□ 0.91
PNKP-213ENST00000599543 DSC1Q08554 894 aa20.73■□□□□ 0.91
PNKP-213ENST00000599543 TTC38Q5R3I4 469 aa20.73■□□□□ 0.91
PNKP-213ENST00000599543 HAUS3Q68CZ6 603 aa20.73■□□□□ 0.91
PNKP-213ENST00000599543 TMC5Q6UXY8 1006 aa20.73■□□□□ 0.91
PNKP-213ENST00000599543 CDR2LQ86X02 465 aaPredicted RBP20.73■□□□□ 0.91
PNKP-213ENST00000599543 NOSTRINQ8IVI9 506 aa20.73■□□□□ 0.91
PNKP-213ENST00000599543 TDRD5Q8NAT2 981 aaKnown RBP20.73■□□□□ 0.91
PNKP-213ENST00000599543 FBXO18Q8NFZ0 1043 aa20.73■□□□□ 0.91
PNKP-213ENST00000599543 PRIMPOLQ96LW4 560 aa20.73■□□□□ 0.91
PNKP-213ENST00000599543 HERC2P3Q9BVR0 1158 aa20.73■□□□□ 0.91
PNKP-213ENST00000599543 PRMT7Q9NVM4 692 aaPredicted RBP20.73■□□□□ 0.91
PNKP-213ENST00000599543 ARHGEF35A5YM69 484 aa20.72■□□□□ 0.91
PNKP-213ENST00000599543 AKAP5P24588 427 aa20.72■□□□□ 0.91
PNKP-213ENST00000599543 RPA1P27694 616 aa20.72■□□□□ 0.91
PNKP-213ENST00000599543 MTMR3Q13615 1198 aa20.72■□□□□ 0.91
PNKP-213ENST00000599543 CDCA2Q69YH5 1023 aaPredicted RBP20.72■□□□□ 0.91
PNKP-213ENST00000599543 KANK3Q6NY19 840 aa20.72■□□□□ 0.91
PNKP-213ENST00000599543 PPP4R3CPQ6ZMV5 832 aa20.72■□□□□ 0.91
PNKP-213ENST00000599543 FBXL6Q8N531 539 aa20.72■□□□□ 0.91
PNKP-213ENST00000599543 PARP2Q9UGN5 583 aa20.72■□□□□ 0.91
PNKP-213ENST00000599543 NOL7Q9UMY1 257 aaKnown RBP20.72■□□□□ 0.91
PNKP-213ENST00000599543 SMC3Q9UQE7 1217 aa20.72■□□□□ 0.91
PNKP-213ENST00000599543 ZMYM2Q9UBW7 1377 aa20.72■□□□□ 0.91
PNKP-213ENST00000599543 LILRB3O75022 631 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 ADH1AP07327 375 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 TRAPPC10P48553 1259 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 GLUD2P49448 558 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 NHLH1Q02575 133 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 TMEM132AQ24JP5 1023 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 PADI6Q6TGC4 694 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 KREMEN2Q8NCW0 462 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 ASIC4Q96FT7 647 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 RPS6KC1Q96S38 1066 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 COLEC11Q9BWP8 271 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 C2orf40Q9H1Z8 148 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 MIOSQ9NXC5 875 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 SORCS3Q9UPU3 1222 aa20.71■□□□□ 0.91
PNKP-213ENST00000599543 K7ELQ4 463 aaPredicted RBP20.7■□□□□ 0.9
PNKP-213ENST00000599543 GRIK3Q13003 919 aa20.7■□□□□ 0.9
PNKP-213ENST00000599543 CUL4AQ13619 759 aa20.7■□□□□ 0.9
PNKP-213ENST00000599543 ELMSAN1Q6PJG2 1045 aa20.7■□□□□ 0.9
PNKP-213ENST00000599543 KLK14Q9P0G3 267 aa20.7■□□□□ 0.9
PNKP-213ENST00000599543 USTQ9Y2C2 406 aa20.7■□□□□ 0.9
PNKP-213ENST00000599543 MTCL1Q9Y4B5 1905 aaKnown RBP20.7■□□□□ 0.9
PNKP-213ENST00000599543 F8W810 466 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 N4BP3O15049 544 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 CYP11B2P19099 503 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 MUTP22033 750 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 CCT6AP40227 531 aaKnown RBP20.69■□□□□ 0.9
PNKP-213ENST00000599543 FXR2P51116 673 aaKnown RBP eCLIP20.69■□□□□ 0.9
PNKP-213ENST00000599543 PRPF4BQ13523 1007 aaKnown RBP20.69■□□□□ 0.9
PNKP-213ENST00000599543 MAPK6Q16659 721 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 FAM187BQ17R55 369 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 CCDC149Q6ZUS6 474 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 TAS1R1Q7RTX1 841 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 GPR149Q86SP6 731 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 UBALD2Q8IYN6 164 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 RNF168Q8IYW5 571 aaPredicted RBP20.69■□□□□ 0.9
PNKP-213ENST00000599543 PLCD3Q8N3E9 789 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 GSTCDQ8NEC7 633 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 DEPTORQ8TB45 409 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 FZD8Q9H461 694 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 MAN1C1Q9NR34 630 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 DPP7Q9UHL4 492 aa20.69■□□□□ 0.9
PNKP-213ENST00000599543 TEX28O15482 410 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 GLUD1P00367 558 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 NAMPTP43490 491 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 NBR1Q14596 966 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 PPP2R5AQ15172 486 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 FUT10Q6P4F1 479 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 C15orf39Q6ZRI6 1047 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 ZDHHC14Q8IZN3 488 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 BSNDQ8WZ55 320 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 ACSF2Q96CM8 615 aaPredicted RBP20.68■□□□□ 0.9
PNKP-213ENST00000599543 PRRX2Q99811 253 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 ADPGKQ9BRR6 497 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 RAB34Q9BZG1 259 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 PDZD7Q9H5P4 517 aa20.68■□□□□ 0.9
PNKP-213ENST00000599543 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.68■□□□□ 0.9
PNKP-213ENST00000599543 BRD1O95696 1058 aa20.67■□□□□ 0.9
PNKP-213ENST00000599543 EFEMP2O95967 443 aa20.67■□□□□ 0.9
PNKP-213ENST00000599543 PRKCBP05771 671 aa20.67■□□□□ 0.9
PNKP-213ENST00000599543 LIG1P18858 919 aa20.67■□□□□ 0.9
PNKP-213ENST00000599543 DSG1Q02413 1049 aa20.67■□□□□ 0.9
PNKP-213ENST00000599543 KIAA0319Q5VV43 1072 aa20.67■□□□□ 0.9
PNKP-213ENST00000599543 ALYREFQ86V81 257 aaKnown RBP20.67■□□□□ 0.9
PNKP-213ENST00000599543 SPRYD3Q8NCJ5 442 aa20.67■□□□□ 0.9
PNKP-213ENST00000599543 IFT74Q96LB3 600 aa20.67■□□□□ 0.9
PNKP-213ENST00000599543 BHMT2Q9H2M3 363 aa20.67■□□□□ 0.9
PNKP-213ENST00000599543 LRWD1Q9UFC0 647 aa20.67■□□□□ 0.9
PNKP-213ENST00000599543 ADAM28Q9UKQ2 775 aa20.67■□□□□ 0.9
PNKP-213ENST00000599543 CACNA1HO95180 2353 aa20.66■□□□□ 0.9
PNKP-213ENST00000599543 ASGR2P07307 311 aa20.66■□□□□ 0.9
PNKP-213ENST00000599543 U2AF2P26368 475 aaKnown RBP eCLIP20.66■□□□□ 0.9
PNKP-213ENST00000599543 USP41Q3LFD5 358 aa20.66■□□□□ 0.9
PNKP-213ENST00000599543 IER5LQ5T953 404 aa20.66■□□□□ 0.9
PNKP-213ENST00000599543 MCTP1Q6DN14 999 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms