RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CCDC43Q96MW1 224 aaKnown RBP23.52■■□□□ 1.36
PNKP-212ENST00000599454 HSD17B14Q9BPX1 270 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 PLEKHA4Q9H4M7 779 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 CHST7Q9NS84 486 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 TPCN1Q9ULQ1 816 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 PCDHA12Q9UN75 941 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 HES2Q9Y543 173 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 CLUHO75153 1309 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 DOCK6Q96HP0 2047 aa23.52■■□□□ 1.36
PNKP-212ENST00000599454 NPR3P17342 541 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 ARF4P18085 180 aaPredicted RBP23.51■■□□□ 1.35
PNKP-212ENST00000599454 CREMQ03060 361 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 CAPSQ13938 189 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 ANKRD1Q15327 319 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 AMHR2Q16671 573 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 EARS2Q5JPH6 523 aaKnown RBP23.51■■□□□ 1.35
PNKP-212ENST00000599454 ASCL5Q7RTU5 278 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 ASAP3Q8TDY4 903 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 ZFP42Q96MM3 310 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 MIOSQ9NXC5 875 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 EPS15L1Q9UBC2 864 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 WNT16Q9UBV4 365 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 CFAP54Q96N23 3096 aa23.51■■□□□ 1.35
PNKP-212ENST00000599454 GBP2P32456 591 aaPredicted RBP23.5■■□□□ 1.35
PNKP-212ENST00000599454 NR5A1Q13285 461 aa23.5■■□□□ 1.35
PNKP-212ENST00000599454 CALCRLQ16602 461 aa23.5■■□□□ 1.35
PNKP-212ENST00000599454 USP41Q3LFD5 358 aa23.5■■□□□ 1.35
PNKP-212ENST00000599454 SLC27A1Q6PCB7 646 aa23.5■■□□□ 1.35
PNKP-212ENST00000599454 CCDC105Q8IYK2 499 aa23.5■■□□□ 1.35
PNKP-212ENST00000599454 SMG7Q92540 1137 aaKnown RBP23.5■■□□□ 1.35
PNKP-212ENST00000599454 TNFRSF25Q93038 417 aa23.5■■□□□ 1.35
PNKP-212ENST00000599454 APOL6Q9BWW8 343 aa23.5■■□□□ 1.35
PNKP-212ENST00000599454 ZDHHC7Q9NXF8 308 aa23.5■■□□□ 1.35
PNKP-212ENST00000599454 FNIP2Q9P278 1114 aa23.5■■□□□ 1.35
PNKP-212ENST00000599454 GVINP1Q7Z2Y8 2422 aa23.49■■□□□ 1.35
PNKP-212ENST00000599454 FAM205CA6NFA0 338 aa23.49■■□□□ 1.35
PNKP-212ENST00000599454 N4BP1O75113 896 aaKnown RBP23.49■■□□□ 1.35
PNKP-212ENST00000599454 CTDNEP1O95476 244 aa23.49■■□□□ 1.35
PNKP-212ENST00000599454 XRCC6P12956 609 aaKnown RBP eCLIP23.49■■□□□ 1.35
PNKP-212ENST00000599454 GLRA2P23416 452 aa23.49■■□□□ 1.35
PNKP-212ENST00000599454 GRIK3Q13003 919 aa23.49■■□□□ 1.35
PNKP-212ENST00000599454 FUT10Q6P4F1 479 aa23.49■■□□□ 1.35
PNKP-212ENST00000599454 SIX5Q8N196 739 aa23.49■■□□□ 1.35
PNKP-212ENST00000599454 NKD2Q969F2 451 aaPredicted RBP23.49■■□□□ 1.35
PNKP-212ENST00000599454 NXF3Q9H4D5 531 aaKnown RBP23.49■■□□□ 1.35
PNKP-212ENST00000599454 TTC12Q9H892 705 aaPredicted RBP23.49■■□□□ 1.35
PNKP-212ENST00000599454 ADAM28Q9UKQ2 775 aa23.49■■□□□ 1.35
PNKP-212ENST00000599454 RFPL2O75678 378 aa23.48■■□□□ 1.35
PNKP-212ENST00000599454 RARRES1P49788 294 aa23.48■■□□□ 1.35
PNKP-212ENST00000599454 ANAPC15P60006 121 aa23.48■■□□□ 1.35
PNKP-212ENST00000599454 GSTCDQ8NEC7 633 aa23.48■■□□□ 1.35
PNKP-212ENST00000599454 PIDD1Q9HB75 910 aa23.48■■□□□ 1.35
PNKP-212ENST00000599454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.48■■□□□ 1.35
PNKP-212ENST00000599454 TRIP11Q15643 1979 aa23.47■■□□□ 1.35
PNKP-212ENST00000599454 A0A1B0GUA9 196 aa23.47■■□□□ 1.35
PNKP-212ENST00000599454 PI15O43692 258 aa23.47■■□□□ 1.35
PNKP-212ENST00000599454 FRMD5Q7Z6J6 570 aa23.47■■□□□ 1.35
PNKP-212ENST00000599454 DTWD2Q8NBA8 298 aa23.47■■□□□ 1.35
PNKP-212ENST00000599454 ZNF707Q96C28 371 aaPredicted RBP23.47■■□□□ 1.35
PNKP-212ENST00000599454 PRIMPOLQ96LW4 560 aa23.47■■□□□ 1.35
PNKP-212ENST00000599454 GPR62Q9BZJ7 368 aa23.47■■□□□ 1.35
PNKP-212ENST00000599454 NT5C3AQ9H0P0 336 aa23.47■■□□□ 1.35
PNKP-212ENST00000599454 POLR3FQ9H1D9 316 aaPredicted RBP23.47■■□□□ 1.35
PNKP-212ENST00000599454 F8W810 466 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 TGM5O43548 720 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 NEMFO60524 1076 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 NPTXRO95502 500 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 SRFP11831 508 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 FDPSP14324 419 aaKnown RBP23.46■■□□□ 1.35
PNKP-212ENST00000599454 AKAP5P24588 427 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 FOXK2Q01167 660 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 LILRA6Q6PI73 481 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 PPP4R3CPQ6ZMV5 832 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 PALB2Q86YC2 1186 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 MYADMQ96S97 322 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 PRKD2Q9BZL6 878 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 PRMT7Q9NVM4 692 aaPredicted RBP23.46■■□□□ 1.35
PNKP-212ENST00000599454 MYH15Q9Y2K3 1946 aa23.46■■□□□ 1.35
PNKP-212ENST00000599454 FANCMQ8IYD8 2048 aa23.45■■□□□ 1.35
PNKP-212ENST00000599454 VWA8A3KMH1 1905 aa23.45■■□□□ 1.35
PNKP-212ENST00000599454 SF3B1O75533 1304 aaKnown RBP eCLIP23.45■■□□□ 1.34
PNKP-212ENST00000599454 B4GALT5O43286 388 aa23.45■■□□□ 1.34
PNKP-212ENST00000599454 NARSO43776 548 aaKnown RBP23.45■■□□□ 1.34
PNKP-212ENST00000599454 TADA2AO75478 443 aa23.45■■□□□ 1.34
PNKP-212ENST00000599454 ANGPT1Q15389 498 aa23.45■■□□□ 1.34
PNKP-212ENST00000599454 SLC44A3Q8N4M1 653 aa23.45■■□□□ 1.34
PNKP-212ENST00000599454 MCPH1Q8NEM0 835 aa23.45■■□□□ 1.34
PNKP-212ENST00000599454 RIN2Q8WYP3 895 aaPredicted RBP23.45■■□□□ 1.34
PNKP-212ENST00000599454 PARP2Q9UGN5 583 aa23.45■■□□□ 1.34
PNKP-212ENST00000599454 MIA3Q5JRA6 1907 aa23.45■■□□□ 1.34
PNKP-212ENST00000599454 CFHP08603 1231 aa23.44■■□□□ 1.34
PNKP-212ENST00000599454 SPATA31D3P0C874 917 aa23.44■■□□□ 1.34
PNKP-212ENST00000599454 RFX1P22670 979 aa23.44■■□□□ 1.34
PNKP-212ENST00000599454 TXKP42681 527 aa23.44■■□□□ 1.34
PNKP-212ENST00000599454 HSP90AA2PQ14568 343 aaPredicted RBP23.44■■□□□ 1.34
PNKP-212ENST00000599454 SPATA31D4Q6ZUB0 917 aa23.44■■□□□ 1.34
PNKP-212ENST00000599454 PIGOQ8TEQ8 1089 aa23.44■■□□□ 1.34
PNKP-212ENST00000599454 RSAD2Q8WXG1 361 aa23.44■■□□□ 1.34
PNKP-212ENST00000599454 MTMR9Q96QG7 549 aa23.44■■□□□ 1.34
PNKP-212ENST00000599454 DAXXQ9UER7 740 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms