RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 TRIM6Q9C030 488 aaPredicted RBP13.78□□□□□ -0.2
SYMPK-210ENST00000598329 TNMDQ9H2S6 317 aa13.78□□□□□ -0.2
SYMPK-210ENST00000598329 OLFML3Q9NRN5 406 aa13.78□□□□□ -0.2
SYMPK-210ENST00000598329 MIOSQ9NXC5 875 aa13.78□□□□□ -0.2
SYMPK-210ENST00000598329 SPG21Q9NZD8 308 aa13.78□□□□□ -0.2
SYMPK-210ENST00000598329 STK39Q9UEW8 545 aa13.78□□□□□ -0.2
SYMPK-210ENST00000598329 COG5Q9UP83 839 aa13.78□□□□□ -0.2
SYMPK-210ENST00000598329 USP20Q9Y2K6 914 aa13.78□□□□□ -0.2
SYMPK-210ENST00000598329 BRWD1Q9NSI6 2320 aa13.78□□□□□ -0.2
SYMPK-210ENST00000598329 NCK2O43639 380 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 TOM1L1O75674 476 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 PPP1R37O75864 691 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 MCF2P10911 925 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 CMA1P23946 247 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 GRM5P41594 1212 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 STAT6P42226 847 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 KRT85P78386 507 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 NUCB2P80303 420 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
SYMPK-210ENST00000598329 MCL1Q07820 350 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 NAB2Q15742 525 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 CTC1Q2NKJ3 1217 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 LONRF3Q496Y0 759 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 ZNF720Q7Z2F6 126 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 APBB1IPQ7Z5R6 666 aaPredicted RBP13.77□□□□□ -0.21
SYMPK-210ENST00000598329 CDR2LQ86X02 465 aaPredicted RBP13.77□□□□□ -0.21
SYMPK-210ENST00000598329 MYCT1Q8N699 235 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 IQUBQ8NA54 791 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 ATXN2LQ8WWM7 1075 aaKnown RBP13.77□□□□□ -0.21
SYMPK-210ENST00000598329 ZFP42Q96MM3 310 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 GAD1Q99259 594 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 PYM1Q9BRP8 204 aaKnown RBP13.77□□□□□ -0.21
SYMPK-210ENST00000598329 TARS2Q9BW92 718 aaKnown RBP13.77□□□□□ -0.21
SYMPK-210ENST00000598329 SCAND2PQ9GZW5 306 aaPredicted RBP13.77□□□□□ -0.21
SYMPK-210ENST00000598329 CDT1Q9H211 546 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 NSUN3Q9H649 340 aaKnown RBP13.77□□□□□ -0.21
SYMPK-210ENST00000598329 MAGEF1Q9HAY2 307 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 TBX20Q9UMR3 447 aa13.77□□□□□ -0.21
SYMPK-210ENST00000598329 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 FAM13AO94988 1023 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 ALDH2P05091 517 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 GAP43P17677 238 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 IBSPP21815 317 aaPredicted RBP13.76□□□□□ -0.21
SYMPK-210ENST00000598329 AKAP5P24588 427 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 MLH1P40692 756 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 ME1P48163 572 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 SLC11A1P49279 550 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 KRT17Q04695 432 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 DHX8Q14562 1220 aaKnown RBP13.76□□□□□ -0.21
SYMPK-210ENST00000598329 FOXD4L6Q3SYB3 417 aaPredicted RBP13.76□□□□□ -0.21
SYMPK-210ENST00000598329 SPOUT1Q5T280 376 aaKnown RBP13.76□□□□□ -0.21
SYMPK-210ENST00000598329 MPZL3Q6UWV2 235 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 FOXD4L3Q6VB84 417 aaPredicted RBP13.76□□□□□ -0.21
SYMPK-210ENST00000598329 MAP4K3Q8IVH8 894 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.76□□□□□ -0.21
SYMPK-210ENST00000598329 THNSL1Q8IYQ7 743 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
SYMPK-210ENST00000598329 HVCN1Q96D96 273 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 IGSF21Q96ID5 467 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 PANK2Q9BZ23 570 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 LRRC27Q9C0I9 530 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 TLR9Q9NR96 1032 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 DNAJB4Q9UDY4 337 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 PUF60Q9UHX1 559 aaKnown RBP13.76□□□□□ -0.21
SYMPK-210ENST00000598329 HPSEQ9Y251 543 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 IRAK3Q9Y616 596 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 STYXL1Q9Y6J8 313 aa13.76□□□□□ -0.21
SYMPK-210ENST00000598329 PTGESO14684 152 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 FAM189A1O60320 539 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 TBCAO75347 108 aaKnown RBP13.75□□□□□ -0.21
SYMPK-210ENST00000598329 RECQL4O94761 1208 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 POMCP01189 267 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 ADRB2P07550 413 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 IRS1P35568 1242 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 ERVFC1P60507 584 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 GRIK3Q13003 919 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 STRN3Q13033 797 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 CCDC85BQ15834 202 aaPredicted RBP13.75□□□□□ -0.21
SYMPK-210ENST00000598329 TCEAL5Q5H9L2 206 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 DDX53Q86TM3 631 aaKnown RBP13.75□□□□□ -0.21
SYMPK-210ENST00000598329 TMEM173Q86WV6 379 aaPredicted RBP13.75□□□□□ -0.21
SYMPK-210ENST00000598329 FAM178BQ8IXR5 827 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 PDILTQ8N807 584 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 C7orf25Q9BPX7 421 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 TRIM9Q9C026 710 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 NGRNQ9NPE2 291 aaKnown RBP13.75□□□□□ -0.21
SYMPK-210ENST00000598329 SNTG2Q9NY99 539 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 INPP5FQ9Y2H2 1132 aa13.75□□□□□ -0.21
SYMPK-210ENST00000598329 A0A1W2PQ27 194 aa13.74□□□□□ -0.21
SYMPK-210ENST00000598329 A0A1W2PQ64 194 aa13.74□□□□□ -0.21
SYMPK-210ENST00000598329 A0A1W2PQD8 194 aa13.74□□□□□ -0.21
SYMPK-210ENST00000598329 NRP1O14786 923 aa13.74□□□□□ -0.21
SYMPK-210ENST00000598329 POLR2DO15514 142 aaKnown RBP13.74□□□□□ -0.21
SYMPK-210ENST00000598329 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.214e-6■■■■■ 31.2
SYMPK-210ENST00000598329 KRT18P05783 430 aaKnown RBP13.74□□□□□ -0.21
SYMPK-210ENST00000598329 PBX3P40426 434 aa13.74□□□□□ -0.21
SYMPK-210ENST00000598329 SCNN1GP51170 649 aa13.74□□□□□ -0.21
SYMPK-210ENST00000598329 AMPD3Q01432 767 aa13.74□□□□□ -0.21
SYMPK-210ENST00000598329 POU5F1Q01860 360 aaKnown RBP13.74□□□□□ -0.21
SYMPK-210ENST00000598329 RNASELQ05823 741 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms