RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 PLCB4Q15147 1175 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 GJC2Q5T442 439 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 GPR161Q8N6U8 529 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 SLC30A5Q8TAD4 765 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 PRPF31Q8WWY3 499 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 FAM167AQ96KS9 214 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 CAPZA3Q96KX2 299 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 MMS19Q96T76 1030 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 DAAM1Q9Y4D1 1078 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 STYXL1Q9Y6J8 313 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 LOC102724159A0A0B4J2E5 919 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 CTAGE15A4D2H0 777 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 GPR25O00155 361 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 NCK2O43639 380 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 CTAGE8P0CG41 777 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 DLATP10515 647 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 RFX1P22670 979 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 ABCD1P33897 745 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 WNT7BP56706 349 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 TTLL4Q14679 1199 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 BMS1Q14692 1282 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 PWP2Q15269 919 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 C10orf76Q5T2E6 689 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 KRT39Q6A163 491 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 PLPPR4Q7Z2D5 763 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 CTAGE6Q86UF2 777 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 CTAGE4Q8IX94 777 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 ATP8B4Q8TF62 1192 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 TARS2Q9BW92 718 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 TMEM8AQ9HCN3 771 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 SNX12Q9UMY4 172 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 PIGRP01833 764 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 CLCN6P51797 869 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 NLRP11P59045 1033 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 TAPT1Q6NXT6 567 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 GLYCTKQ8IVS8 523 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 LRRC71Q8N4P6 559 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 NOA1Q8NC60 698 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 TAS1R2Q8TE23 839 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 U2AF1L4Q8WU68 220 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 SCFD2Q8WU76 684 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 ELMO3Q96BJ8 720 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 SUGCTQ9HAC7 445 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 DIS3Q9Y2L1 958 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 COQ4Q9Y3A0 265 aa18.45■□□□□ 0.54
SHKBP1-216ENST00000598201 TTLL13PA6NNM8 815 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 PDE2AO00408 941 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 EXTL3O43909 919 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 ADCY3O60266 1144 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 PALMO75781 387 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 SP3Q02447 781 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 KIF22Q14807 665 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 SV2AQ7L0J3 742 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 VPS36Q86VN1 386 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 TRAPPC12Q8WVT3 735 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 PSPC1Q8WXF1 523 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 KREMEN1Q96MU8 473 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 TLR10Q9BXR5 811 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 PARD6BQ9BYG5 372 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 ZNF446Q9NWS9 450 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 SIP14410 1827 aa18.44■□□□□ 0.54
SHKBP1-216ENST00000598201 ZNF233A6NK53 670 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 ACOT2P49753 483 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 ARHGAP1Q07960 439 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 ZBTB41Q5SVQ8 909 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 NFRKBQ6P4R8 1299 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 MAMDC4Q6UXC1 1216 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 CRELD2Q6UXH1 353 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 COG1Q8WTW3 980 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 ZNF516Q92618 1163 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 ZBTB10Q96DT7 871 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 ANKZF1Q9H8Y5 726 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 AGO2Q9UKV8 859 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 PCDHGC5Q9Y5F6 944 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 PLXNB2O15031 1838 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 IGKV6-21A0A0C4DH24 114 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 BTNL10A8MVZ5 291 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 GPC3P51654 580 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 PALB2Q86YC2 1186 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 PSMB7Q99436 277 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 TMEM134Q9H6X4 195 aa18.43■□□□□ 0.54
SHKBP1-216ENST00000598201 FAM170AA1A519 330 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 GRID2IPA4D2P6 1211 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 ECM2O94769 699 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 HSPA1AP0DMV8 641 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 HSPA1BP0DMV9 641 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 SCP2P22307 547 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 GTF2H1P32780 548 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 IER5Q5VY09 327 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 LMBRD2Q68DH5 695 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 CREG2Q8IUH2 290 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 PPM1KQ8N3J5 372 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 FBXL13Q8NEE6 735 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 SLC20A1Q8WUM9 679 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 OSBPL9Q96SU4 736 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 SMARCAD1Q9H4L7 1026 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 ANKFY1Q9P2R3 1169 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 PPME1Q9Y570 386 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 PLXNA1Q9UIW2 1896 aa18.42■□□□□ 0.54
SHKBP1-216ENST00000598201 FTCDO95954 541 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms