RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
LIG1-213ENST00000596672 MYH11P35749 1972 aa11.61□□□□□ -0.55
LIG1-213ENST00000596672 RIF1Q5UIP0 2472 aaKnown RBP11.61□□□□□ -0.55
LIG1-213ENST00000596672 ZFHX2Q9C0A1 2572 aaPredicted RBP11.61□□□□□ -0.55
LIG1-213ENST00000596672 NOTCH4Q99466 2003 aa11.6□□□□□ -0.55
LIG1-213ENST00000596672 ABLIM1O14639 778 aa11.6□□□□□ -0.55
LIG1-213ENST00000596672 AXLP30530 894 aa11.6□□□□□ -0.55
LIG1-213ENST00000596672 CLCN4P51793 760 aa11.6□□□□□ -0.55
LIG1-213ENST00000596672 TFDP1Q14186 410 aa11.6□□□□□ -0.55
LIG1-213ENST00000596672 PDIA5Q14554 519 aa11.6□□□□□ -0.55
LIG1-213ENST00000596672 RARS2Q5T160 578 aaKnown RBP11.6□□□□□ -0.55
LIG1-213ENST00000596672 CCDC51Q96ER9 411 aa11.6□□□□□ -0.55
LIG1-213ENST00000596672 ADAM7Q9H2U9 754 aa11.6□□□□□ -0.55
LIG1-213ENST00000596672 SNTG2Q9NY99 539 aa11.6□□□□□ -0.55
LIG1-213ENST00000596672 FAM50BQ9Y247 325 aa11.6□□□□□ -0.55
LIG1-213ENST00000596672 FAN1Q9Y2M0 1017 aa11.6□□□□□ -0.55
LIG1-213ENST00000596672 ARHGEF35A5YM69 484 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 SFI1A8K8P3 1242 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 PRR33A8MZF0 331 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 C2CD4DB7Z1M9 353 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 TEX28O15482 410 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 ALDH2P05091 517 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 PRKCBP05771 671 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 ALADP13716 330 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 OR1G1P47890 313 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 ATP2C1P98194 919 aaPredicted RBP11.59□□□□□ -0.55
LIG1-213ENST00000596672 SLC27A1Q6PCB7 646 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 C1orf186Q6ZWK4 172 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 CEP120Q8N960 986 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 MCPH1Q8NEM0 835 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 URGCPQ8TCY9 931 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 SNX29Q8TEQ0 813 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 EDAQ92838 391 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 PLIN2Q99541 437 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 HERC2P3Q9BVR0 1158 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 CHST7Q9NS84 486 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 GIT1Q9Y2X7 761 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 KMT2EQ8IZD2 1858 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 MYO15AQ9UKN7 3530 aa11.59□□□□□ -0.55
LIG1-213ENST00000596672 NPHP3-ACAD11A0A0J9YXS1 232 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 ACKR2O00590 384 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 C2CD2LO14523 706 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 ADAM12O43184 909 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 EIF5BO60841 1220 aaKnown RBP11.58□□□□□ -0.56
LIG1-213ENST00000596672 N4BP1O75113 896 aaKnown RBP11.58□□□□□ -0.56
LIG1-213ENST00000596672 PDGFBP01127 241 aaPredicted RBP11.58□□□□□ -0.56
LIG1-213ENST00000596672 SOD2P04179 222 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 SPATA31D3P0C874 917 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 HOXB8P17481 243 aaPredicted RBP11.58□□□□□ -0.56
LIG1-213ENST00000596672 RPL17P18621 184 aaKnown RBP11.58□□□□□ -0.56
LIG1-213ENST00000596672 LIG1P18858 919 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 NAMPTP43490 491 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 ZXDAP98168 799 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 PCBP1Q15365 356 aaKnown RBP eCLIP11.58□□□□□ -0.56
LIG1-213ENST00000596672 ARSHQ5FYA8 562 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 RINT1Q6NUQ1 792 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 TMC5Q6UXY8 1006 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 SPATA31D4Q6ZUB0 917 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 CNNM3Q8NE01 707 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 CASP10Q92851 521 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 ASIC4Q96FT7 647 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 RXFP1Q9HBX9 757 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 PTPRHQ9HD43 1115 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 KANSL3Q9P2N6 904 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 CITO14578 2027 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 VPS13AQ96RL7 3174 aa11.58□□□□□ -0.56
LIG1-213ENST00000596672 USP34Q70CQ2 3546 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 HIP1RO75146 1068 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 RFPL2O75678 378 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 RECQL4O94761 1208 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 ASGR2P07307 311 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 MUTP22033 750 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 CA8P35219 290 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 PRPHP41219 470 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 NPTX2P47972 431 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 DSG1Q02413 1049 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 SOX4Q06945 474 aaPredicted RBP11.57□□□□□ -0.56
LIG1-213ENST00000596672 PRPF4BQ13523 1007 aaKnown RBP11.57□□□□□ -0.56
LIG1-213ENST00000596672 CUL4AQ13619 759 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 RTP2Q5QGT7 225 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 HYIQ5T013 277 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 IER5LQ5T953 404 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 MCTP1Q6DN14 999 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 LILRA6Q6PI73 481 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 TRIM67Q6ZTA4 783 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 ERMNQ8TAM6 284 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 HASPINQ8TF76 798 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 RSPH1Q8WYR4 309 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 ZNF707Q96C28 371 aaPredicted RBP11.57□□□□□ -0.56
LIG1-213ENST00000596672 ZBTB45Q96K62 511 aaPredicted RBP11.57□□□□□ -0.56
LIG1-213ENST00000596672 PRIMPOLQ96LW4 560 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 FBXL18Q96ME1 805 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 RPS6KC1Q96S38 1066 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 POP1Q99575 1024 aaKnown RBP11.57□□□□□ -0.56
LIG1-213ENST00000596672 HAPLN2Q9GZV7 340 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 PRMT7Q9NVM4 692 aaPredicted RBP11.57□□□□□ -0.56
LIG1-213ENST00000596672 PARP2Q9UGN5 583 aa11.57□□□□□ -0.56
LIG1-213ENST00000596672 NOL7Q9UMY1 257 aaKnown RBP11.57□□□□□ -0.56
LIG1-213ENST00000596672 PDCD11Q14690 1871 aaKnown RBP11.57□□□□□ -0.56
LIG1-213ENST00000596672 CASTOR2A6NHX0 329 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms