RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 PROZP22891 400 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 AKAP5P24588 427 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 CASP5P51878 434 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 ERVK-21P61565 698 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 UBE2HP62256 183 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 NOMO2Q5JPE7 1267 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 FAM26FQ5R3K3 315 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 MPZL3Q6UWV2 235 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 STXBP4Q6ZWJ1 553 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 SPRED2Q7Z698 418 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 URGCPQ8TCY9 931 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 ARNTL2Q8WYA1 636 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 ZBTB45Q96K62 511 aaPredicted RBP15.73■□□□□ 0.11
LIG1-208ENST00000595758 ACCSQ96QU6 501 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 C17orf80Q9BSJ5 609 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 FGFBP2Q9BYJ0 223 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 CDT1Q9H211 546 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 TYW1Q9NV66 732 aaKnown RBP15.73■□□□□ 0.11
LIG1-208ENST00000595758 ANKFY1Q9P2R3 1169 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 PARP2Q9UGN5 583 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 MTUS1Q9ULD2 1270 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 INPP5FQ9Y2H2 1132 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 GIT1Q9Y2X7 761 aa15.73■□□□□ 0.11
LIG1-208ENST00000595758 ABLIM1O14639 778 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 CLDN3O15551 220 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 KLRC4O43908 158 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 KINO60870 393 aaKnown RBP15.72■□□□□ 0.11
LIG1-208ENST00000595758 NR1I2O75469 434 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 PRR29P0C7W0 189 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 HARSP12081 509 aaKnown RBP15.72■□□□□ 0.11
LIG1-208ENST00000595758 MATR3P43243 847 aaKnown RBP eCLIP15.72■□□□□ 0.11
LIG1-208ENST00000595758 EHHADHQ08426 723 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 GRIN2CQ14957 1233 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 NOLC1Q14978 699 aaKnown RBP eCLIP15.72■□□□□ 0.11
LIG1-208ENST00000595758 SPOUT1Q5T280 376 aaKnown RBP15.72■□□□□ 0.11
LIG1-208ENST00000595758 L1TD1Q5T7N2 865 aaKnown RBP15.72■□□□□ 0.11
LIG1-208ENST00000595758 LRRC55Q6ZSA7 311 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 TMEM192Q8IY95 271 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 LRRC43Q8N309 656 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 CLP1Q92989 425 aaKnown RBP15.72■□□□□ 0.11
LIG1-208ENST00000595758 TIGD1Q96MW7 591 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 SAMD11Q96NU1 681 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 GBP4Q96PP9 640 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 GAD1Q99259 594 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 MRPL9Q9BYD2 267 aaKnown RBP15.72■□□□□ 0.11
LIG1-208ENST00000595758 EXOC1Q9NV70 894 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 SNTG2Q9NY99 539 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 EXOC7Q9UPT5 735 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 RWDD3Q9Y3V2 267 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 COL4A6Q14031 1691 aa15.72■□□□□ 0.11
LIG1-208ENST00000595758 CHD9Q3L8U1 2897 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 MYO9BQ13459 2157 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 ARL5CA6NH57 179 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 PRPF6O94906 941 aaKnown RBP15.71■□□□□ 0.11
LIG1-208ENST00000595758 RPN1P04843 607 aaKnown RBP15.71■□□□□ 0.11
LIG1-208ENST00000595758 BMPR1AP36894 532 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 MLH1P40692 756 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 GRM5P41594 1212 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 MCL1Q07820 350 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 KCNA1Q09470 495 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 DPYDQ12882 1025 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 POSTNQ15063 836 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 KMT5BQ4FZB7 885 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 EPC2Q52LR7 807 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 SYCP3Q8IZU3 236 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 GLIS3Q8NEA6 775 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 CCDC47Q96A33 483 aaKnown RBP15.71■□□□□ 0.11
LIG1-208ENST00000595758 CCDC94Q9BW85 323 aaPredicted RBP15.71■□□□□ 0.11
LIG1-208ENST00000595758 AAASQ9NRG9 546 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 KLK14Q9P0G3 267 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 KANSL3Q9P2N6 904 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 HOOK1Q9UJC3 728 aaKnown RBP15.71■□□□□ 0.11
LIG1-208ENST00000595758 GDAQ9Y2T3 454 aa15.71■□□□□ 0.11
LIG1-208ENST00000595758 ANKRD63C9JTQ0 380 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 INPPL1O15357 1258 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 RECQL4O94761 1208 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 LINC00271P0C7V0 271 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 CTNNB1P35222 781 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 AFF1P51825 1210 aaKnown RBP15.7■□□□□ 0.1
LIG1-208ENST00000595758 OSTNP61366 133 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 RNASELQ05823 741 aaKnown RBP15.7■□□□□ 0.1
LIG1-208ENST00000595758 PSMD2Q13200 908 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 SLFN12LQ6IEE8 588 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 SLC39A4Q6P5W5 647 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 EPM2AIP1Q7L775 607 aaPredicted RBP15.7■□□□□ 0.1
LIG1-208ENST00000595758 THNSL1Q8IYQ7 743 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 FBXO22Q8NEZ5 403 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 ZFP42Q96MM3 310 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 PRDM12Q9H4Q4 367 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 CWH43Q9H720 699 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 TMEM206Q9H813 350 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 SLC39A2Q9NP94 309 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 TBC1D13Q9NVG8 400 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 MTMR10Q9NXD2 777 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 HCSTQ9UBK5 93 aa15.7■□□□□ 0.1
LIG1-208ENST00000595758 FNDC1Q4ZHG4 1894 aaPredicted RBP15.69■□□□□ 0.1
LIG1-208ENST00000595758 A0A0B4J269 797 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 EPOPA6NHQ4 379 aa15.69■□□□□ 0.1
LIG1-208ENST00000595758 EIF3DO15371 548 aaKnown RBP eCLIP15.69■□□□□ 0.1
LIG1-208ENST00000595758 POMCP01189 267 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms