RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 EDIL3O43854 480 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 TDGF1P13385 188 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 MAGEA9P43362 315 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 N4BP2L1Q5TBK1 243 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 LAIR1Q6GTX8 287 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 PRSS55Q6UWB4 352 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 RSPO2Q6UXX9 243 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 PRR23BQ6ZRT6 265 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 MTSS1LQ765P7 747 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 TEX2Q8IWB9 1127 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 ZFP42Q96MM3 310 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 PHF20Q9BVI0 1012 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 PLA2G2FQ9BZM2 168 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 HEBP1Q9NRV9 189 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 SEMA4GQ9NTN9 838 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 BRPF3Q9ULD4 1205 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 POLIQ9UNA4 740 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 HES2Q9Y543 173 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 CNTNAP2Q9UHC6 1331 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 DSPP15924 2871 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 RETP07949 1114 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 SRGAP2CP0DJJ0 459 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 ITGA4P13612 1032 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 NCLP19338 710 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 MLH1P40692 756 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 RPS9P46781 194 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 SCNN1GP51170 649 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 PFKPQ01813 784 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 DSC1Q08554 894 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 DMWDQ09019 674 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 SRSF5Q13243 272 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 XKR3Q5GH77 459 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 APOA5Q6Q788 366 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 ING5Q8WYH8 240 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 NELL2Q99435 816 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 EIF2AQ9BY44 585 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 GLT8D2Q9H1C3 349 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 HCFC1R1Q9NWW0 138 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 FNIP2Q9P278 1114 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 CACNG4Q9UBN1 327 aa15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 NDRG2Q9UN36 371 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-208ENST00000595726 WDFY3Q8IZQ1 3526 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 NCAM2O15394 837 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 GAS7O60861 476 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 MAFO75444 373 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 CIITAP33076 1130 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 ADCY1Q08828 1119 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 RTN1Q16799 776 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 USP41Q3LFD5 358 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 TSGA10IPQ3SY00 556 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 PLA2G4FQ68DD2 849 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 FUT10Q6P4F1 479 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 POTEHQ6S545 545 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 ZNF852Q6ZMS4 543 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 SYNE3Q6ZMZ3 975 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 PRR23CQ6ZRP0 262 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 SGMS1Q86VZ5 419 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 RASEFQ8IZ41 740 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 CELF5Q8N6W0 485 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 ZNF579Q8NAF0 562 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 MBOAT7Q96N66 472 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 COLEC11Q9BWP8 271 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 APOL6Q9BWW8 343 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 FAM126AQ9BYI3 521 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 RBM28Q9NW13 759 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 WDR81Q562E7 1941 aa15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 MTCL1Q9Y4B5 1905 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-208ENST00000595726 HRO43593 1189 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 C1RP00736 705 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 PMLP29590 882 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 CDC27P30260 824 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 JAK3P52333 1124 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 ADCK5Q3MIX3 580 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 RTP2Q5QGT7 225 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 PPM1LQ5SGD2 360 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 LRCH2Q5VUJ6 765 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 NPAS3Q8IXF0 933 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 ZNF687Q8N1G0 1237 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 PRPF31Q8WWY3 499 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 SLC5A5Q92911 643 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 TMEM143Q96AN5 459 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 MCRS1Q96EZ8 462 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 TCEANC2Q96MN5 208 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 FBXW11Q9UKB1 542 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 IPPQ9Y573 584 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 COL4A3BPQ9Y5P4 624 aa15.37■□□□□ 0.05
SHKBP1-208ENST00000595726 PKD1L2Q7Z442 2459 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 hCG_1984214I3L0E3 225 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 ADAM12O43184 909 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 C8AP07357 584 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 SFNP31947 248 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 NRLP54845 237 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 NPEPPSP55786 919 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 SIM2Q14190 667 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 CSRP2Q16527 193 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 ANO5Q75V66 913 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 MIER3Q7Z3K6 550 aa15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 REXO1Q8N1G1 1221 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-208ENST00000595726 ZNF713Q8N859 430 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms