RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 MMP13P45452 471 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 GCLMP48507 274 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 EIF3BP55884 814 aaKnown RBP16.49■□□□□ 0.23
ZNF541-205ENST00000595558 MRPS9P82933 396 aaKnown RBP16.49■□□□□ 0.23
ZNF541-205ENST00000595558 DRP2Q13474 957 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 KIF22Q14807 665 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 PARP9Q8IXQ6 854 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 RPUSD2Q8IZ73 545 aaKnown RBP16.49■□□□□ 0.23
ZNF541-205ENST00000595558 CHURC1Q8WUH1 139 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 MYCBPQ99417 103 aaPredicted RBP16.49■□□□□ 0.23
ZNF541-205ENST00000595558 ACTR5Q9H9F9 607 aaPredicted RBP16.49■□□□□ 0.23
ZNF541-205ENST00000595558 GEMIN8Q9NWZ8 242 aaKnown RBP16.49■□□□□ 0.23
ZNF541-205ENST00000595558 PGAP2Q9UHJ9 254 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 GGT7Q9UJ14 662 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 TPX2Q9ULW0 747 aaKnown RBP16.49■□□□□ 0.23
ZNF541-205ENST00000595558 CHUKO15111 745 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 MAP2K2P36507 400 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 SYCP3Q8IZU3 236 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 SCLT1Q96NL6 688 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 MYOZ2Q9NPC6 264 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 ZNRF3Q9ULT6 936 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 BRCA2P51587 3418 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 GOLGA8IPA6NC78 632 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 GOLGA8JA6NMD2 632 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 PHF2O75151 1096 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 SGPL1O95470 568 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 MTMR2Q13614 643 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 PLA2G4FQ68DD2 849 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 CCDC137Q6PK04 289 aaKnown RBP16.48■□□□□ 0.23
ZNF541-205ENST00000595558 HOOK3Q86VS8 718 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 CEP57Q86XR8 500 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 NIM1KQ8IY84 436 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 CLEC4DQ8WXI8 215 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 MKNK1Q9BUB5 465 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 CCDC113Q9H0I3 377 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 GJA3Q9Y6H8 435 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 FAM187AA6NFU0 413 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 RGS16O15492 202 aaPredicted RBP16.48■□□□□ 0.23
ZNF541-205ENST00000595558 CREB1P16220 341 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 PEX5P50542 639 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 CDR1P51861 262 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 ZNF131P52739 623 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 DHX34Q14147 1143 aaKnown RBP16.48■□□□□ 0.23
ZNF541-205ENST00000595558 NBPF12Q5TAG4 269 aaPredicted RBP16.48■□□□□ 0.23
ZNF541-205ENST00000595558 NSMFQ6X4W1 530 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 CCDC25Q86WR0 208 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 SUPT20HQ8NEM7 779 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 PLEKHO2Q8TD55 490 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 ZSWIM1Q9BR11 485 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 CBWD1Q9BRT8 395 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 CNOT10Q9H9A5 744 aaKnown RBP16.48■□□□□ 0.23
ZNF541-205ENST00000595558 TUFT1Q9NNX1 390 aa16.48■□□□□ 0.23
ZNF541-205ENST00000595558 CALCAP01258 141 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 PPP2R5CQ13362 524 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 E2F5Q15329 346 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 LACTB2Q53H82 288 aaPredicted RBP16.47■□□□□ 0.23
ZNF541-205ENST00000595558 C1orf220Q5T0J3 134 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 PGM2Q96G03 612 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 NAP1L3Q99457 506 aaPredicted RBP16.47■□□□□ 0.23
ZNF541-205ENST00000595558 ELAC2Q9BQ52 826 aaKnown RBP16.47■□□□□ 0.23
ZNF541-205ENST00000595558 DIS3Q9Y2L1 958 aaKnown RBP16.47■□□□□ 0.23
ZNF541-205ENST00000595558 MRPL11Q9Y3B7 192 aaKnown RBP16.47■□□□□ 0.23
ZNF541-205ENST00000595558 CHRNB2P17787 502 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 PTGER2P43116 358 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 LRRC14Q15048 493 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 NFIL3Q16649 462 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 OTUD6AQ7L8S5 288 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 RTKN2Q8IZC4 609 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 CCDC197Q8NCU1 140 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 SGSM3Q96HU1 749 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 DDX23Q9BUQ8 820 aaKnown RBP16.47■□□□□ 0.23
ZNF541-205ENST00000595558 ZHX2Q9Y6X8 837 aa16.47■□□□□ 0.23
ZNF541-205ENST00000595558 CCT8L1PA6NM43 557 aa16.46■□□□□ 0.23
ZNF541-205ENST00000595558 DHX15O43143 795 aaKnown RBP16.46■□□□□ 0.23
ZNF541-205ENST00000595558 CTNNA2P26232 953 aa16.46■□□□□ 0.23
ZNF541-205ENST00000595558 RPS6P62753 249 aaKnown RBP16.46■□□□□ 0.23
ZNF541-205ENST00000595558 SNCBQ16143 134 aa16.46■□□□□ 0.23
ZNF541-205ENST00000595558 PADI6Q6TGC4 694 aa16.46■□□□□ 0.23
ZNF541-205ENST00000595558 NOP9Q86U38 636 aaKnown RBP16.46■□□□□ 0.23
ZNF541-205ENST00000595558 MXRA8Q9BRK3 442 aa16.46■□□□□ 0.23
ZNF541-205ENST00000595558 INTS9Q9NV88 658 aaKnown RBP16.46■□□□□ 0.23
ZNF541-205ENST00000595558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.46■□□□□ 0.23
ZNF541-205ENST00000595558 TRPC6Q9Y210 931 aa16.46■□□□□ 0.23
ZNF541-205ENST00000595558 STK24Q9Y6E0 443 aa16.46■□□□□ 0.23
ZNF541-205ENST00000595558 ARHGEF35A5YM69 484 aa16.46■□□□□ 0.22
ZNF541-205ENST00000595558 RIPK2O43353 540 aa16.46■□□□□ 0.22
ZNF541-205ENST00000595558 RARAP10276 462 aa16.46■□□□□ 0.22
ZNF541-205ENST00000595558 PPP2R5AQ15172 486 aa16.46■□□□□ 0.22
ZNF541-205ENST00000595558 SLC47A2Q86VL8 602 aa16.46■□□□□ 0.22
ZNF541-205ENST00000595558 MGARPQ8TDB4 240 aa16.46■□□□□ 0.22
ZNF541-205ENST00000595558 CENPTQ96BT3 561 aa16.46■□□□□ 0.22
ZNF541-205ENST00000595558 TEPSINQ96N21 525 aa16.46■□□□□ 0.22
ZNF541-205ENST00000595558 MLXIPLQ9NP71 852 aa16.46■□□□□ 0.22
ZNF541-205ENST00000595558 A1CFQ9NQ94 594 aaKnown RBP16.46■□□□□ 0.22
ZNF541-205ENST00000595558 DNAJC17Q9NVM6 304 aaKnown RBP16.46■□□□□ 0.22
ZNF541-205ENST00000595558 CCDC169A6NNP5 214 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 K7ENM7 598 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 VIMP08670 466 aaKnown RBP16.45■□□□□ 0.22
ZNF541-205ENST00000595558 CHRNA3P32297 505 aa16.45■□□□□ 0.22
ZNF541-205ENST00000595558 GPC5P78333 572 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms