RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 CYP2C9P11712 490 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 CST5P28325 142 aaPredicted RBP14.38□□□□□ -0.11
VRK3-205ENST00000593919 GPC3P51654 580 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 NLRP11P59045 1033 aaKnown RBP14.38□□□□□ -0.11
VRK3-205ENST00000593919 GNG11P61952 73 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 ZNF200P98182 395 aaPredicted RBP14.38□□□□□ -0.11
VRK3-205ENST00000593919 KCNMA1Q12791 1236 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 KCNA10Q16322 511 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 ZPBP2Q6X784 338 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 RUFY4Q6ZNE9 571 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 GPD1LQ8N335 351 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 C7orf31Q8N865 590 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 NLRP7Q8WX94 980 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 CCDC51Q96ER9 411 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 CRACR2AQ9BSW2 395 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 FZD8Q9H461 694 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 ABHD10Q9NUJ1 306 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 SMIM35A0A1B0GVV1 85 aa14.37□□□□□ -0.11
VRK3-205ENST00000593919 TTC26A0AVF1 554 aa14.37□□□□□ -0.11
VRK3-205ENST00000593919 C17orf102A2RUQ5 167 aa14.37□□□□□ -0.11
VRK3-205ENST00000593919 CSDE1O75534 798 aaKnown RBP14.37□□□□□ -0.11
VRK3-205ENST00000593919 URI1O94763 535 aaPredicted RBP14.37□□□□□ -0.11
VRK3-205ENST00000593919 KRT13P13646 458 aa14.37□□□□□ -0.11
VRK3-205ENST00000593919 DLG4P78352 724 aa14.37□□□□□ -0.11
VRK3-205ENST00000593919 SLFN12LQ6IEE8 588 aa14.37□□□□□ -0.11
VRK3-205ENST00000593919 CCSAPQ6IQ19 270 aaPredicted RBP14.37□□□□□ -0.11
VRK3-205ENST00000593919 PLEKHO2Q8TD55 490 aa14.37□□□□□ -0.11
VRK3-205ENST00000593919 SCLT1Q96NL6 688 aa14.37□□□□□ -0.11
VRK3-205ENST00000593919 ACO2Q99798 780 aaKnown RBP14.37□□□□□ -0.11
VRK3-205ENST00000593919 FAM213AQ9BRX8 229 aa14.37□□□□□ -0.11
VRK3-205ENST00000593919 MMRN2Q9H8L6 949 aa14.37□□□□□ -0.11
VRK3-205ENST00000593919 FAM207AQ9NSI2 230 aaPredicted RBP14.37□□□□□ -0.11
VRK3-205ENST00000593919 AGO2Q9UKV8 859 aaKnown RBP14.37□□□□□ -0.11
VRK3-205ENST00000593919 ADGRG1Q9Y653 693 aa14.37□□□□□ -0.11
VRK3-205ENST00000593919 A0A0B4J269 797 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 ACKR2O00590 384 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 EPHB6O15197 1021 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 B4GALT5O43286 388 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 TOM1L1O75674 476 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 CASQ1P31415 396 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 KRT9P35527 623 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 MATR3P43243 847 aaKnown RBP eCLIP14.36□□□□□ -0.11
VRK3-205ENST00000593919 VAMP7P51809 220 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 TMEM62Q0P6H9 643 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 KIZQ2M2Z5 673 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 NBPF20Q3BBV1 942 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 ZNF410Q86VK4 478 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 LRRN4CLQ8ND94 238 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 WDR24Q96S15 920 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 LZTFL1Q9NQ48 299 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 ANK1P16157 1881 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 A0A0U1RQJ8 604 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 KIAA0391O15091 583 aaKnown RBP14.36□□□□□ -0.11
VRK3-205ENST00000593919 CLDN3O15551 220 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 EXTL3O43909 919 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 GNAT1P11488 350 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 FMO5P49326 533 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 PRPF4BQ13523 1007 aaKnown RBP14.36□□□□□ -0.11
VRK3-205ENST00000593919 ELF2Q15723 593 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 CBWD6Q4V339 395 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 FIGNQ5HY92 759 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 CBWD3Q5JTY5 395 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 CBWD5Q5RIA9 395 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 DNAJB3Q8WWF6 145 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 ATRIPQ8WXE1 791 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 MSTO1Q9BUK6 570 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 NUP58Q9BVL2 599 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 HMX1Q9NP08 348 aaPredicted RBP14.36□□□□□ -0.11
VRK3-205ENST00000593919 AGPAT5Q9NUQ2 364 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 PRMT7Q9NVM4 692 aaPredicted RBP14.36□□□□□ -0.11
VRK3-205ENST00000593919 WBP1LQ9NX94 342 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 GTF2IRD1Q9UHL9 959 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 CAPN11Q9UMQ6 739 aa14.36□□□□□ -0.11
VRK3-205ENST00000593919 GTPBP10A4D1E9 387 aaKnown RBP14.35□□□□□ -0.11
VRK3-205ENST00000593919 ABLIM1O14639 778 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 GPR32O75388 356 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 HARSP12081 509 aaKnown RBP14.35□□□□□ -0.11
VRK3-205ENST00000593919 FECHP22830 423 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 ACOT2P49753 483 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 CYP24A1Q07973 514 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 AMHR2Q16671 573 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 FAM187BQ17R55 369 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 EXOC3L4Q17RC7 722 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 C1orf220Q5T0J3 134 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 TSHZ1Q6ZSZ6 1077 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 RNF180Q86T96 592 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
VRK3-205ENST00000593919 ACRBPQ8NEB7 543 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 PARD3BQ8TEW8 1205 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 SH3TC2Q8TF17 1288 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 MFSD14AQ96MC6 490 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 LSM14BQ9BX40 385 aaKnown RBP14.35□□□□□ -0.11
VRK3-205ENST00000593919 ADAMTS10Q9H324 1103 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 GCNT4Q9P109 453 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 GINS2Q9Y248 185 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 CITO14578 2027 aa14.35□□□□□ -0.11
VRK3-205ENST00000593919 PROZP22891 400 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 MCCD1P59942 119 aaPredicted RBP14.34□□□□□ -0.11
VRK3-205ENST00000593919 C1QTNF8P60827 252 aa14.34□□□□□ -0.11
VRK3-205ENST00000593919 APBA1Q02410 837 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms