RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 GLB1LQ6UWU2 654 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 ZBTB33Q86T24 672 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 FIBCD1Q8N539 461 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 HELQQ8TDG4 1101 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 CDT1Q9H211 546 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 RSAD1Q9HA92 442 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 UBN1Q9NPG3 1134 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 RNF19AQ9NV58 838 aa16.36■□□□□ 0.21
DDX39A-221ENST00000593026 LAMA2P24043 3122 aaKnown RBP16.36■□□□□ 0.21
DDX39A-221ENST00000593026 TMEM265A0A087WTH1 108 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 LINC01553A4QN01 128 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 MEIS3P2A8K0S8 358 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 ABLIM1O14639 778 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 EIF3DO15371 548 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDX39A-221ENST00000593026 CLDN3O15551 220 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 MCF2P10911 925 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 HARSP12081 509 aaKnown RBP16.35■□□□□ 0.21
DDX39A-221ENST00000593026 PNOCQ13519 176 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDX39A-221ENST00000593026 AGMOQ6ZNB7 445 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 GLIS3Q8NEA6 775 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 RSPH1Q8WYR4 309 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 ZBTB45Q96K62 511 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-221ENST00000593026 SLC39A2Q9NP94 309 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 LMBRD1Q9NUN5 540 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 INPP5FQ9Y2H2 1132 aa16.35■□□□□ 0.21
DDX39A-221ENST00000593026 FNDC1Q4ZHG4 1894 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-221ENST00000593026 PRPF6O94906 941 aaKnown RBP16.34■□□□□ 0.21
DDX39A-221ENST00000593026 ARHGEF15O94989 841 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 AKAP5P24588 427 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 TAP1Q03518 808 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 MCL1Q07820 350 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 KCNA1Q09470 495 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 PSMD2Q13200 908 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 ZNF697Q5TEC3 545 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 EPM2AIP1Q7L775 607 aaPredicted RBP16.34■□□□□ 0.21
DDX39A-221ENST00000593026 ELOA2Q8IYF1 753 aaPredicted RBP16.34■□□□□ 0.21
DDX39A-221ENST00000593026 SYCP3Q8IZU3 236 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 LRRC43Q8N309 656 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 CASD1Q96PB1 797 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 MRPL9Q9BYD2 267 aaKnown RBP16.34■□□□□ 0.21
DDX39A-221ENST00000593026 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 TMEM206Q9H813 350 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 PARP2Q9UGN5 583 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 GIT1Q9Y2X7 761 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 UBE4BO95155 1302 aa16.34■□□□□ 0.21
DDX39A-221ENST00000593026 OFD1O75665 1012 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 RHOBTB3O94955 611 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 SMC2O95347 1197 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 MLH1P40692 756 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 GRM5P41594 1212 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 KCNB1Q14721 858 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 NOMO2Q5JPE7 1267 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 SLC39A4Q6P5W5 647 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 CEP120Q8N960 986 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 URGCPQ8TCY9 931 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 TGS1Q96RS0 853 aaKnown RBP16.33■□□□□ 0.2
DDX39A-221ENST00000593026 CCDC94Q9BW85 323 aaPredicted RBP16.33■□□□□ 0.2
DDX39A-221ENST00000593026 IKZF4Q9H2S9 585 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 ZNF576Q9H609 170 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 SNTG2Q9NY99 539 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 GDAQ9Y2T3 454 aa16.33■□□□□ 0.2
DDX39A-221ENST00000593026 MRPL42Q9Y6G3 142 aaKnown RBP16.33■□□□□ 0.2
DDX39A-221ENST00000593026 ARL5CA6NH57 179 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 TISP43B9A030 160 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 ANKRD63C9JTQ0 380 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 RECQL4O94761 1208 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 YARSP54577 528 aaKnown RBP16.32■□□□□ 0.2
DDX39A-221ENST00000593026 OSTNP61366 133 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 STK4Q13043 487 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 SLFN12LQ6IEE8 588 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 THNSL1Q8IYQ7 743 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 DEFB123Q8N688 67 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 KIAA0895Q8NCT3 520 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 ZNF507Q8TCN5 953 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 SCFD1Q8WVM8 642 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 ERCC4Q92889 916 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-221ENST00000593026 SMARCE1Q969G3 411 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 ZFP42Q96MM3 310 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 GSDMAQ96QA5 445 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 RPS6KC1Q96S38 1066 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 GAD1Q99259 594 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 MSTO1Q9BUK6 570 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 HAPLN2Q9GZV7 340 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 TTYH1Q9H313 450 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-221ENST00000593026 TYW1Q9NV66 732 aaKnown RBP16.32■□□□□ 0.2
DDX39A-221ENST00000593026 RMND1Q9NWS8 449 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 ZMYM2Q9UBW7 1377 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 RWDD3Q9Y3V2 267 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 PCDHA5Q9Y5H7 936 aa16.32■□□□□ 0.2
DDX39A-221ENST00000593026 A0A0B4J269 797 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 INPPL1O15357 1258 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 AFF1P51825 1210 aaKnown RBP16.31■□□□□ 0.2
DDX39A-221ENST00000593026 ERVK-21P61565 698 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 RNASELQ05823 741 aaKnown RBP16.31■□□□□ 0.2
DDX39A-221ENST00000593026 KYAT1Q16773 422 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 SPOUT1Q5T280 376 aaKnown RBP16.31■□□□□ 0.2
DDX39A-221ENST00000593026 SPRED2Q7Z698 418 aa16.31■□□□□ 0.2
DDX39A-221ENST00000593026 SPATA20Q8TB22 786 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms