RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 CDHR5Q9HBB8 845 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 KCNG1Q9UIX4 513 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 SQORQ9Y6N5 450 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 DCHS1Q96JQ0 3298 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 ARID2Q68CP9 1835 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 MED19A0JLT2 244 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-219ENST00000592927 LRRIQ4A6NIV6 560 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 CCDC169A6NNP5 214 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 SFI1A8K8P3 1242 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 MBTPS2O43462 519 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 NBNO60934 754 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 PLS3P13797 630 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 DARSP14868 501 aaKnown RBP13.06□□□□□ -0.32
DDX39A-219ENST00000592927 EIF4BP23588 611 aaKnown RBP13.06□□□□□ -0.32
DDX39A-219ENST00000592927 LTBRP36941 435 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 PHKA2P46019 1235 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 PEX3P56589 373 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 ZXDAP98168 799 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 POU5F1BQ06416 359 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 MAPK7Q13164 816 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 DMP1Q13316 513 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-219ENST00000592927 CAPSQ13938 189 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 MBTPS1Q14703 1052 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 FBXO47Q5MNV8 452 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 MYCT1Q8N699 235 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 DEPTORQ8TB45 409 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 DNAJC19Q96DA6 116 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 INO80BQ9C086 356 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-219ENST00000592927 C17orf75Q9HAS0 396 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 PARVGQ9HBI0 331 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 LARSQ9P2J5 1176 aaKnown RBP13.06□□□□□ -0.32
DDX39A-219ENST00000592927 MYO15AQ9UKN7 3530 aa13.06□□□□□ -0.32
DDX39A-219ENST00000592927 TECTAO75443 2155 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 FRMD3A2A2Y4 597 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 RPS6KA5O75582 802 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 CXCL10P02778 98 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 IDEP14735 1019 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 NAMPTP43490 491 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 SMTNP53814 917 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 PTENP60484 403 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 MYL5Q02045 173 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 PAK2Q13177 524 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 LPIN1Q14693 890 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 GPNMBQ14956 572 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 ODR4Q5SWX8 454 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 TSHZ1Q6ZSZ6 1077 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 LUZP1Q86V48 1076 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 ZBTB8OSQ8IWT0 167 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 DHX40Q8IX18 779 aaKnown RBP13.05□□□□□ -0.32
DDX39A-219ENST00000592927 BSNDQ8WZ55 320 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 SEPT8Q92599 483 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 C2orf40Q9H1Z8 148 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 IFT122Q9HBG6 1241 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 KMT5AQ9NQR1 393 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 NOC2LQ9Y3T9 749 aaKnown RBP13.05□□□□□ -0.32
DDX39A-219ENST00000592927 COL4A6Q14031 1691 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
DDX39A-219ENST00000592927 PTPRZ1P23471 2315 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-219ENST00000592927 PPP1R3GB7ZBB8 358 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 INO80B-WBP1J3KQ70 363 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 GPR182O15218 404 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 CSDE1O75534 798 aaKnown RBP13.04□□□□□ -0.32
DDX39A-219ENST00000592927 KIF20AO95235 890 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 GAP43P17677 238 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 SFPQP23246 707 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX39A-219ENST00000592927 CD52P31358 61 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 DEKP35659 375 aaKnown RBP13.04□□□□□ -0.32
DDX39A-219ENST00000592927 NPTX2P47972 431 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 ZNF131P52739 623 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 DLX2Q07687 328 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-219ENST00000592927 EHHADHQ08426 723 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 NFX1Q12986 1120 aaKnown RBP13.04□□□□□ -0.32
DDX39A-219ENST00000592927 TCTN1Q2MV58 587 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 EPC2Q52LR7 807 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 PLEKHG4Q58EX7 1191 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 CNKSR3Q6P9H4 555 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 AOPEPQ8N6M6 819 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 ENOX1Q8TC92 643 aaKnown RBP13.04□□□□□ -0.32
DDX39A-219ENST00000592927 TMEM40Q8WWA1 233 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 SPIRE2Q8WWL2 714 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 DHTKD1Q96HY7 919 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-219ENST00000592927 NFKBIZQ9BYH8 718 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 IFIH1Q9BYX4 1025 aaKnown RBP13.04□□□□□ -0.32
DDX39A-219ENST00000592927 OSBPL7Q9BZF2 842 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 NSUN3Q9H649 340 aaKnown RBP13.04□□□□□ -0.32
DDX39A-219ENST00000592927 AGO3Q9H9G7 860 aaKnown RBP13.04□□□□□ -0.32
DDX39A-219ENST00000592927 PANK4Q9NVE7 773 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 PADI3Q9ULW8 664 aa13.04□□□□□ -0.32
DDX39A-219ENST00000592927 EVPLQ92817 2033 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 H0YCG3 227 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 RBAK-RBAKDNI3L0D1 243 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 EFNA5P52803 228 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 GPM6BQ13491 265 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 PCBP1Q15365 356 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX39A-219ENST00000592927 CDCA2Q69YH5 1023 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-219ENST00000592927 CATSPER4Q7RTX7 472 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 FAM228AQ86W67 206 aa13.03□□□□□ -0.32
DDX39A-219ENST00000592927 IFNLR1Q8IU57 520 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-219ENST00000592927 ADSSL1Q8N142 457 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms