RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 MLLT6P55198 1093 aaPredicted RBP7.84□□□□□ -1.15
VMP1-215ENST00000592619 CDC42EP1Q00587 391 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 UBE3CQ15386 1083 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 CNN3Q15417 329 aaKnown RBP7.84□□□□□ -1.15
VMP1-215ENST00000592619 MST1LQ2TV78 715 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 C10orf62Q5T681 223 aaPredicted RBP7.84□□□□□ -1.15
VMP1-215ENST00000592619 TMEM132EQ6IEE7 984 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 Q6ZVL8 140 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 RHOT1Q8IXI2 618 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 ZNF526Q8TF50 670 aaPredicted RBP7.84□□□□□ -1.15
VMP1-215ENST00000592619 GFM2Q969S9 779 aaKnown RBP7.84□□□□□ -1.15
VMP1-215ENST00000592619 ZBTB8AQ96BR9 441 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 CYFIP2Q96F07 1278 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 DMRTA2Q96SC8 542 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 MYD88Q99836 296 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 NSUN3Q9H649 340 aaKnown RBP7.84□□□□□ -1.15
VMP1-215ENST00000592619 MANSC1Q9H8J5 431 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 SYNJ1O43426 1573 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 DAPK3O43293 454 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 FRS3O43559 492 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 PQBP1O60828 265 aaKnown RBP7.83□□□□□ -1.16
VMP1-215ENST00000592619 HNRNPLP14866 589 aaKnown RBP eCLIP7.83□□□□□ -1.162e-7■■■■□ 20.4
VMP1-215ENST00000592619 PEX2P28328 305 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 SERPINB3P29508 390 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 ECHS1P30084 290 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 ETV4P43268 484 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 SLC6A9P48067 706 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 PRR23BQ6ZRT6 265 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 FAM186BQ8IYM0 893 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 IFNL2Q8IZJ0 200 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 C3orf20Q8ND61 904 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 PIK3C3Q8NEB9 887 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 LRTOMTQ8WZ04 291 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 FAM167AQ96KS9 214 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 DIRC2Q96SL1 478 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 NUP62CLQ9H1M0 184 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 GCM1Q9NP62 436 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 TDP1Q9NUW8 608 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 CDC42EP3Q9UKI2 254 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 SIK3Q9Y2K2 1263 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 DAAM1Q9Y4D1 1078 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 PCDHGB6Q9Y5F9 930 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 CARMIL2Q6F5E8 1435 aa7.83□□□□□ -1.16
VMP1-215ENST00000592619 EIF4G3O43432 1585 aaKnown RBP7.82□□□□□ -1.16
VMP1-215ENST00000592619 KLHL18O94889 574 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 ARIH2O95376 493 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 IL13P35225 146 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 EPHB3P54753 998 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 WNT3AP56704 352 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 NOGQ13253 232 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 SWSAP1Q6NVH7 229 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 TRMT10BQ6PF06 316 aaKnown RBP7.82□□□□□ -1.16
VMP1-215ENST00000592619 PLBD2Q8NHP8 589 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 PARD3BQ8TEW8 1205 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 ZCCHC14Q8WYQ9 949 aaKnown RBP7.82□□□□□ -1.16
VMP1-215ENST00000592619 CLPTM1LQ96KA5 538 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 MRGPRX4Q96LA9 322 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 NAP1L5Q96NT1 182 aaPredicted RBP7.82□□□□□ -1.16
VMP1-215ENST00000592619 SAMD11Q96NU1 681 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 BCO1Q9HAY6 547 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 CALCOCO1Q9P1Z2 691 aa7.82□□□□□ -1.16
VMP1-215ENST00000592619 PUF60Q9UHX1 559 aaKnown RBP7.82□□□□□ -1.16
VMP1-215ENST00000592619 MGEA5O60502 916 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 PRAMEF4O60810 478 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 ZKSCAN1P17029 563 aaPredicted RBP7.81□□□□□ -1.16
VMP1-215ENST00000592619 ADSLP30566 484 aaPredicted RBP7.81□□□□□ -1.16
VMP1-215ENST00000592619 STAT5BP51692 787 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 KCNQ1P51787 676 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 RAB1AP62820 205 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 NKX6-1P78426 367 aaPredicted RBP7.81□□□□□ -1.16
VMP1-215ENST00000592619 DHX8Q14562 1220 aaKnown RBP7.81□□□□□ -1.16
VMP1-215ENST00000592619 RAB39AQ14964 217 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 POLD3Q15054 466 aaPredicted RBP7.81□□□□□ -1.16
VMP1-215ENST00000592619 CCDC157Q569K6 752 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 CLEC14AQ86T13 490 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 SRLQ86TD4 932 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 ZNF480Q8WV37 535 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 PGBD4Q96DM1 585 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 UIMC1Q96RL1 719 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 KATNBL1Q9H079 304 aa7.81□□□□□ -1.16
VMP1-215ENST00000592619 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.81□□□□□ -1.16
VMP1-215ENST00000592619 SOGA1O94964 1423 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 CFAP69A5D8W1 941 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 GASTP01350 101 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 HMGCRP04035 888 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 MYL3P08590 195 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 ZNF28P17035 718 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 RPL17P18621 184 aaKnown RBP7.8□□□□□ -1.16
VMP1-215ENST00000592619 IFIT5Q13325 482 aaKnown RBP7.8□□□□□ -1.16
VMP1-215ENST00000592619 SMAD4Q13485 552 aaKnown RBP7.8□□□□□ -1.16
VMP1-215ENST00000592619 FGL2Q14314 439 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 LONRF1Q17RB8 773 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 MSL3Q8N5Y2 521 aaKnown RBP7.8□□□□□ -1.16
VMP1-215ENST00000592619 ENAHQ8N8S7 591 aaPredicted RBP7.8□□□□□ -1.16
VMP1-215ENST00000592619 OR7D4Q8NG98 312 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 LPPQ93052 612 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 MTFMTQ96DP5 389 aaKnown RBP7.8□□□□□ -1.16
VMP1-215ENST00000592619 SGPP1Q9BX95 441 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 C22orf23Q9BZE7 217 aa7.8□□□□□ -1.16
VMP1-215ENST00000592619 PLCB1Q9NQ66 1216 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms