RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 CASP10Q92851 521 aa15.31■□□□□ 0.04
APOC1-208ENST00000592535 APOL5Q9BWW9 433 aa15.31■□□□□ 0.04
APOC1-208ENST00000592535 HCFC2Q9Y5Z7 792 aa15.31■□□□□ 0.04
APOC1-208ENST00000592535 IRAK3Q9Y616 596 aa15.31■□□□□ 0.04
APOC1-208ENST00000592535 F8W810 466 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 PI4K2BG5E9Z4 385 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 SSBP05455 408 aaKnown RBP eCLIP15.3■□□□□ 0.04
APOC1-208ENST00000592535 EFNA5P52803 228 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 PEX3P56589 373 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 MAPK7Q13164 816 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 GIT2Q14161 759 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 PTPN14Q15678 1187 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 NT5DC1Q5TFE4 455 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 C1orf186Q6ZWK4 172 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 POP1Q99575 1024 aaKnown RBP15.3■□□□□ 0.04
APOC1-208ENST00000592535 C1QTNF1Q9BXJ1 281 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 S1PR5Q9H228 398 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 SNTG2Q9NY99 539 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 ZMYM2Q9UBW7 1377 aa15.3■□□□□ 0.04
APOC1-208ENST00000592535 PLXNA3P51805 1871 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 CCDC169A6NNP5 214 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 NPTX2P47972 431 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 GRIK3Q13003 919 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 TMEM119Q4V9L6 283 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 CABP7Q86V35 215 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 TMEM87AQ8NBN3 555 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 SUSD6Q92537 303 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 CDK5RAP3Q96JB5 506 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 DRC1Q96MC2 740 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 RPS6KC1Q96S38 1066 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 ADPGKQ9BRR6 497 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 HERC2P3Q9BVR0 1158 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 NT5C3AQ9H0P0 336 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 CXCL16Q9H2A7 254 aa15.29■□□□□ 0.04
APOC1-208ENST00000592535 PHLPP2Q6ZVD8 1323 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 SFI1A8K8P3 1242 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 K7ERI5 159 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 RECQL4O94761 1208 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 EFEMP2O95967 443 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 SOD2P04179 222 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 EPCAMP16422 314 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 HOXB8P17481 243 aaPredicted RBP15.28■□□□□ 0.04
APOC1-208ENST00000592535 PDCP20941 246 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 GUCY2CP25092 1073 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 SLC12A3P55017 1021 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 GRIN1Q05586 938 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 RAD51AP2Q09MP3 1159 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 DMP1Q13316 513 aaPredicted RBP15.28■□□□□ 0.04
APOC1-208ENST00000592535 SF3A1Q15459 793 aaKnown RBP15.28■□□□□ 0.04
APOC1-208ENST00000592535 ATF7IP2Q5U623 682 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 TAS1R3Q7RTX0 852 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 TAS1R1Q7RTX1 841 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 RNF168Q8IYW5 571 aaPredicted RBP15.28■□□□□ 0.04
APOC1-208ENST00000592535 SYT2Q8N9I0 419 aaPredicted RBP15.28■□□□□ 0.04
APOC1-208ENST00000592535 SLC22A17Q8WUG5 538 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 RABGGTAQ92696 567 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 AK8Q96MA6 479 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 KLHL5Q96PQ7 755 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 C11orf16Q9NQ32 467 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 KMT5AQ9NQR1 393 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 ARHGAP28Q9P2N2 729 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 CACNG4Q9UBN1 327 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 STK39Q9UEW8 545 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 CDH22Q9UJ99 828 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 C5orf42Q9H799 3197 aa15.28■□□□□ 0.04
APOC1-208ENST00000592535 FAM86C2PA6NEL3 165 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 LOC730098B7Z3J9 87 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 C2CD2LO14523 706 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 PTGESO14684 152 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 LILRB3O75022 631 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 NR1I2O75469 434 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 BMP15O95972 392 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 URODP06132 367 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 CNPP09543 421 aaKnown RBP15.27■□□□□ 0.04
APOC1-208ENST00000592535 PLA2G4BP0C869 781 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 SYT1P21579 422 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 CBX2Q14781 532 aaPredicted RBP15.27■□□□□ 0.04
APOC1-208ENST00000592535 DCAF4L1Q3SXM0 396 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 TPRNQ4KMQ1 711 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 KCTD17Q8N5Z5 321 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 LRRC15Q8TF66 581 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 TIPINQ9BVW5 301 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 COLEC11Q9BWP8 271 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 PHF7Q9BWX1 381 aaPredicted RBP15.27■□□□□ 0.04
APOC1-208ENST00000592535 TMEM134Q9H6X4 195 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 MRPL17Q9NRX2 175 aaKnown RBP15.27■□□□□ 0.04
APOC1-208ENST00000592535 TNFSF13BQ9Y275 285 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 GDAQ9Y2T3 454 aa15.27■□□□□ 0.04
APOC1-208ENST00000592535 CITO14578 2027 aa15.27■□□□□ 0.03
APOC1-208ENST00000592535 MYH15Q9Y2K3 1946 aa15.27■□□□□ 0.03
APOC1-208ENST00000592535 NPHP3-ACAD11A0A0J9YXS1 232 aa15.26■□□□□ 0.03
APOC1-208ENST00000592535 K7ELQ4 463 aaPredicted RBP15.26■□□□□ 0.03
APOC1-208ENST00000592535 SLC16A4O15374 487 aa15.26■□□□□ 0.03
APOC1-208ENST00000592535 DCXO43602 365 aa15.26■□□□□ 0.03
APOC1-208ENST00000592535 ALADP13716 330 aa15.26■□□□□ 0.03
APOC1-208ENST00000592535 COL9A1P20849 921 aa15.26■□□□□ 0.03
APOC1-208ENST00000592535 UBA7P41226 1012 aa15.26■□□□□ 0.03
APOC1-208ENST00000592535 GLUD2P49448 558 aa15.26■□□□□ 0.03
APOC1-208ENST00000592535 CACNB1Q02641 598 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms