RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 USP20Q9Y2K6 914 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 HES2Q9Y543 173 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 IPPQ9Y573 584 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 CNTNAP2Q9UHC6 1331 aa15.35■□□□□ 0.05
CLIP3-205ENST00000592017 KIAA1671Q9BY89 1806 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 C2orf71A6NGG8 1288 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 PI4K2BG5E9Z4 385 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 SPTLC2O15270 562 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 DDHD2O94830 711 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 KRT18P05783 430 aaKnown RBP15.34■□□□□ 0.05
CLIP3-205ENST00000592017 ITGA4P13612 1032 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 NPTX2P47972 431 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 SLC27A1Q6PCB7 646 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 TMEM184AQ6ZMB5 413 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 LINC00301Q8NCQ3 95 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 SMRP1Q8NCR6 262 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 URGCPQ8TCY9 931 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 TMEM169Q96HH4 297 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 IGSF21Q96ID5 467 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 PRIMPOLQ96LW4 560 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 VN1R3Q9BXE9 311 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 C1QTNF1Q9BXJ1 281 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 CCDC113Q9H0I3 377 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 GBP3Q9H0R5 595 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 FZD8Q9H461 694 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 NXF3Q9H4D5 531 aaKnown RBP15.34■□□□□ 0.05
CLIP3-205ENST00000592017 RSAD1Q9HA92 442 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 KMT5AQ9NQR1 393 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 BLOC1S4Q9NUP1 217 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 PHLPP2Q6ZVD8 1323 aa15.34■□□□□ 0.05
CLIP3-205ENST00000592017 ATG2AQ2TAZ0 1938 aa15.33■□□□□ 0.05
CLIP3-205ENST00000592017 C5orf42Q9H799 3197 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 TTLL13PA6NNM8 815 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 N4BP3O15049 544 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 SLC16A4O15374 487 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 YEATS4O95619 227 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 CXCL14O95715 111 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 POMCP01189 267 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 EDN1P05305 212 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 EFNA5P52803 228 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 RNASELQ05823 741 aaKnown RBP15.33■□□□□ 0.04
CLIP3-205ENST00000592017 FAM187BQ17R55 369 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 RRAGBQ5VZM2 374 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 HACE1Q8IYU2 909 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 CNNM3Q8NE01 707 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 AUTS2Q8WXX7 1259 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 LARP4BQ92615 738 aaKnown RBP15.33■□□□□ 0.04
CLIP3-205ENST00000592017 GAD1Q99259 594 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 REEP2Q9BRK0 252 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 ZHX3Q9H4I2 956 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 PDZD7Q9H5P4 517 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 C11orf16Q9NQ32 467 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 MIOSQ9NXC5 875 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 KCND2Q9NZV8 630 aa15.33■□□□□ 0.04
CLIP3-205ENST00000592017 USP15Q9Y4E8 981 aaPredicted RBP15.33■□□□□ 0.04
CLIP3-205ENST00000592017 A0A1B0GUA9 196 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 K7ERI5 159 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 ACKR2O00590 384 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 INPPL1O15357 1258 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 TBCAO75347 108 aaKnown RBP15.32■□□□□ 0.04
CLIP3-205ENST00000592017 PLS3P13797 630 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 MLH1P40692 756 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 DNM1Q05193 864 aaKnown RBP15.32■□□□□ 0.04
CLIP3-205ENST00000592017 SMC1AQ14683 1233 aaKnown RBP15.32■□□□□ 0.04
CLIP3-205ENST00000592017 ARSHQ5FYA8 562 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 LLGL2Q6P1M3 1020 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 SYCE2Q6PIF2 218 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 DDX53Q86TM3 631 aaKnown RBP15.32■□□□□ 0.04
CLIP3-205ENST00000592017 VPS52Q8N1B4 723 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 ADPGKQ9BRR6 497 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 ZBP1Q9H171 429 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 S1PR5Q9H228 398 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 KANSL3Q9P2N6 904 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 STK17AQ9UEE5 414 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 PARP2Q9UGN5 583 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 RAPGEFL1Q9UHV5 662 aa15.32■□□□□ 0.04
CLIP3-205ENST00000592017 MORC2Q9Y6X9 1032 aaPredicted RBP15.32■□□□□ 0.04
CLIP3-205ENST00000592017 ARL5CA6NH57 179 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 CLASP2O75122 1294 aaKnown RBP15.31■□□□□ 0.04
CLIP3-205ENST00000592017 PPP6R2O75170 966 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 FAM13AO94988 1023 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 BRD1O95696 1058 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 ALDH2P05091 517 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 COL9A1P20849 921 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 AKAP5P24588 427 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 STAT6P42226 847 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 ATF7IP2Q5U623 682 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 EEF1DP3Q658K8 133 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 ANKRD54Q6NXT1 300 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 PDILTQ8N807 584 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 SUSD6Q92537 303 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 ZFP42Q96MM3 310 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 FAM193BQ96PV7 902 aaPredicted RBP15.31■□□□□ 0.04
CLIP3-205ENST00000592017 LRFN3Q9BTN0 628 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 PANK2Q9BZ23 570 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 C17orf75Q9HAS0 396 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 UBN1Q9NPG3 1134 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 ARHGAP28Q9P2N2 729 aa15.31■□□□□ 0.04
CLIP3-205ENST00000592017 ODF2LQ9ULJ1 636 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms