RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 KIF23Q02241 960 aaPredicted RBP4.56□□□□□ -1.68
VMP1-212ENST00000591782 APBA1Q02410 837 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 EFEMP1Q12805 493 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 MRPL49Q13405 166 aaKnown RBP4.56□□□□□ -1.68
VMP1-212ENST00000591782 ELAVL1Q15717 326 aaKnown RBP4.56□□□□□ -1.68
VMP1-212ENST00000591782 UAP1L1Q3KQV9 507 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 TMEM240Q5SV17 173 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 CMTR2Q8IYT2 770 aaKnown RBP4.56□□□□□ -1.68
VMP1-212ENST00000591782 TRMT2AQ8IZ69 625 aaKnown RBP4.56□□□□□ -1.68
VMP1-212ENST00000591782 CPA6Q8N4T0 437 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 ZNF808Q8N4W9 903 aaPredicted RBP4.56□□□□□ -1.68
VMP1-212ENST00000591782 FBXO18Q8NFZ0 1043 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 OR7D4Q8NG98 312 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.56□□□□□ -1.68
VMP1-212ENST00000591782 COA7Q96BR5 231 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 UHRF1Q96T88 793 aaPredicted RBP4.56□□□□□ -1.68
VMP1-212ENST00000591782 CDC5LQ99459 802 aaKnown RBP4.56□□□□□ -1.68
VMP1-212ENST00000591782 MPHOSPH9Q99550 1183 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 PDCD2LQ9BRP1 358 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 ANP32EQ9BTT0 268 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 EPC1Q9H2F5 836 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 BCO1Q9HAY6 547 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 IP6K2Q9UHH9 426 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 SIK3Q9Y2K2 1263 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 TCAF1Q9Y4C2 921 aa4.56□□□□□ -1.68
VMP1-212ENST00000591782 FAM171A2A8MVW0 826 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 CAPN14A8MX76 684 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 WNT10BO00744 389 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 HTRA2O43464 458 aaPredicted RBP4.55□□□□□ -1.68
VMP1-212ENST00000591782 AKAP10O43572 662 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 ENDOD1O94919 500 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 S100BP04271 92 aaPredicted RBP4.55□□□□□ -1.68
VMP1-212ENST00000591782 EDNRBP24530 442 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 PTPN7P35236 360 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 WASP42768 502 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 SELENOPP49908 381 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 RAB27AP51159 221 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 ADKP55263 362 aaKnown RBP4.55□□□□□ -1.68
VMP1-212ENST00000591782 HHEXQ03014 270 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 PIN1Q13526 163 aaPredicted RBP4.55□□□□□ -1.68
VMP1-212ENST00000591782 C3orf36Q3SXR2 165 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 HS1BP3Q53T59 392 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 MFSD14BQ5SR56 506 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 GJC2Q5T442 439 aaPredicted RBP4.55□□□□□ -1.68
VMP1-212ENST00000591782 SPTY2D1Q68D10 685 aaPredicted RBP4.55□□□□□ -1.68
VMP1-212ENST00000591782 MFSD5Q6N075 450 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 MAMDC4Q6UXC1 1216 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 SGMS1Q86VZ5 419 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 XYLT1Q86Y38 959 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 ELOA2Q8IYF1 753 aaPredicted RBP4.55□□□□□ -1.68
VMP1-212ENST00000591782 PQLC1Q8N2U9 271 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 CEP95Q96GE4 821 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 ADOQ96SZ5 270 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 POLR3GLQ9BT43 218 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 KLC2Q9H0B6 622 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 LDAHQ9H6V9 325 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 HECAQ9UBI9 543 aaPredicted RBP4.55□□□□□ -1.68
VMP1-212ENST00000591782 SAP30BPQ9UHR5 308 aaKnown RBP4.55□□□□□ -1.68
VMP1-212ENST00000591782 LIMCH1Q9UPQ0 1083 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 IPPQ9Y573 584 aa4.55□□□□□ -1.68
VMP1-212ENST00000591782 B8ZZF3 427 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 ABLIM3O94929 683 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 GNAT2P19087 354 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 EPHB1P54762 984 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 ADAM17P78536 824 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 R3HDM1Q15032 1099 aaKnown RBP4.54□□□□□ -1.68
VMP1-212ENST00000591782 PDZD4Q76G19 769 aaPredicted RBP4.54□□□□□ -1.68
VMP1-212ENST00000591782 MIGA2Q7L4E1 593 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 APBB1IPQ7Z5R6 666 aaPredicted RBP4.54□□□□□ -1.68
VMP1-212ENST00000591782 RHOT1Q8IXI2 618 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 PALM2Q8IXS6 379 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 MIER2Q8N344 545 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 MB21D1Q8N884 522 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 CCHCR1Q8TD31 782 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 STON2Q8WXE9 905 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 ST8SIA2Q92186 375 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 EDAQ92838 391 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 FAM89AQ96GI7 184 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 BORCS6Q96GS4 357 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 C7orf25Q9BPX7 421 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 LSM14BQ9BX40 385 aaKnown RBP4.54□□□□□ -1.68
VMP1-212ENST00000591782 RTFDC1Q9BY42 306 aaPredicted RBP4.54□□□□□ -1.68
VMP1-212ENST00000591782 SENP6Q9GZR1 1112 aaPredicted RBP4.54□□□□□ -1.68
VMP1-212ENST00000591782 TCF7L1Q9HCS4 588 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 LANCL2Q9NS86 450 aa4.54□□□□□ -1.68
VMP1-212ENST00000591782 CCDC154A6NI56 674 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 MUSKO15146 869 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 MFAP3LO75121 409 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 IL33O95760 270 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 PF4V1P10720 104 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 ZNF20P17024 532 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 ZSCAN20P17040 1043 aaPredicted RBP4.53□□□□□ -1.68
VMP1-212ENST00000591782 HK1P19367 917 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 FPR1P21462 350 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 PCSK1P29120 753 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 HIBADHP31937 336 aaKnown RBP4.53□□□□□ -1.68
VMP1-212ENST00000591782 GUCY1A2P33402 732 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 FLT3LGP49771 235 aa4.53□□□□□ -1.68
VMP1-212ENST00000591782 IL10RAQ13651 578 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms