RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	PARP2	Q9UGN5	583 aa		18.05	■□□□□ 0.48
CIRBP-233	ENST00000591622	VCAN	P13611	3396 aa		18.05	■□□□□ 0.48
CIRBP-233	ENST00000591622	ZMYM2	Q9UBW7	1377 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	SPTLC2	O15270	562 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	PPP6R2	O75170	966 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	YEATS4	O95619	227 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	ALDH2	P05091	517 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	SCNN1G	P51170	649 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	EP400NL	Q6ZTU2	488 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	TMEM161B	Q8NDZ6	487 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	GSTCD	Q8NEC7	633 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	TCF25	Q9BQ70	676 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	TMEM175	Q9BSA9	504 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	MRPL4	Q9BYD3	311 aa	Known RBP	18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	TLE6	Q9H808	572 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	NGRN	Q9NPE2	291 aa	Known RBP	18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	ENTPD7	Q9NQZ7	604 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	MIOS	Q9NXC5	875 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	KLK14	Q9P0G3	267 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	STK17A	Q9UEE5	414 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	TNFSF13B	Q9Y275	285 aa		18.04	■□□□□ 0.48
CIRBP-233	ENST00000591622	SPTBN5	Q9NRC6	3674 aa	Known RBP	18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	PLXNA4	Q9HCM2	1894 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	KRT18	P05783	430 aa	Known RBP	18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	LTBR	P36941	435 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	NRIP1	P48552	1158 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	DSC1	Q08554	894 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	ADAM15	Q13444	863 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	GIT2	Q14161	759 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	DCAF4L1	Q3SXM0	396 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	LEXM	Q3ZCV2	418 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	RRAGB	Q5VZM2	374 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	TMC7	Q7Z402	723 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	DDX53	Q86TM3	631 aa	Known RBP	18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	RBM23	Q86U06	439 aa	Known RBP	18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	BCL7C	Q8WUZ0	217 aa	Predicted RBP	18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	ACO2	Q99798	780 aa	Known RBP	18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	SNTG2	Q9NY99	539 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622	FAN1	Q9Y2M0	1017 aa		18.03	■□□□□ 0.48
CIRBP-233	ENST00000591622		H3BQ06	376 aa	Predicted RBP	18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	NRP1	O14786	923 aa		18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	LINC01565	O15544	149 aa		18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	MAPT	P10636	758 aa	Known RBP	18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	ZNF131	P52739	623 aa		18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	NCKAP1L	P55160	1127 aa		18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	STRN3	Q13033	797 aa		18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	PLPP4	Q5VZY2	271 aa		18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	COLGALT2	Q8IYK4	626 aa		18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	EFHB	Q8N7U6	833 aa		18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	TARS2	Q9BW92	718 aa	Known RBP	18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	PARVG	Q9HBI0	331 aa		18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	PTPRH	Q9HD43	1115 aa		18.02	■□□□□ 0.48
CIRBP-233	ENST00000591622	HIDE1	A8MVS5	230 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622		H0YCG3	227 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	PER2	O15055	1255 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	RECQL4	O94761	1208 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	FAM13A	O94988	1023 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	GRIK3	Q13003	919 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	SMC1A	Q14683	1233 aa	Known RBP	18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	ATL3	Q6DD88	541 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	CCDC73	Q6ZRK6	1079 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	HAUS6	Q7Z4H7	955 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	VPS52	Q8N1B4	723 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	MYCT1	Q8N699	235 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	MRPL43	Q8N983	215 aa	Known RBP	18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	ADAMTS19	Q8TE59	1207 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	KCNN1	Q92952	543 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	RPS6KC1	Q96S38	1066 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	PANK2	Q9BZ23	570 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	CDT1	Q9H211	546 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	STK39	Q9UEW8	545 aa		18.01	■□□□□ 0.47
CIRBP-233	ENST00000591622	FSD2	A1L4K1	749 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	TBCA	O75347	108 aa	Known RBP	18	■□□□□ 0.47
CIRBP-233	ENST00000591622	NR1I2	O75469	434 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	SCP2	P22307	547 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	PROZ	P22891	400 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	OR1G1	P47890	313 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	DLX2	Q07687	328 aa	Predicted RBP	18	■□□□□ 0.47
CIRBP-233	ENST00000591622	BMS1	Q14692	1282 aa	Known RBP	18	■□□□□ 0.47
CIRBP-233	ENST00000591622	DUSP6	Q16828	381 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	ZNF568	Q3ZCX4	644 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	SV2B	Q7L1I2	683 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	CDCA3	Q99618	268 aa	Predicted RBP	18	■□□□□ 0.47
CIRBP-233	ENST00000591622	TCHP	Q9BT92	498 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	VN1R3	Q9BXE9	311 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	ZBP1	Q9H171	429 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	ZHX3	Q9H4I2	956 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	GDA	Q9Y2T3	454 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622	PRG3	Q9Y2Y8	225 aa	Predicted RBP	18	■□□□□ 0.47
CIRBP-233	ENST00000591622	ATG2A	Q2TAZ0	1938 aa		18	■□□□□ 0.47
CIRBP-233	ENST00000591622		A0A087X0B3	334 aa		17.99	■□□□□ 0.47
CIRBP-233	ENST00000591622	C2orf71	A6NGG8	1288 aa		17.99	■□□□□ 0.47
CIRBP-233	ENST00000591622	ABLIM1	O14639	778 aa		17.99	■□□□□ 0.47
CIRBP-233	ENST00000591622	PTGES	O14684	152 aa		17.99	■□□□□ 0.47
CIRBP-233	ENST00000591622	TRAK2	O60296	914 aa		17.99	■□□□□ 0.47

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