RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ATL2Q8NHH9 583 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 TXNDC9O14530 226 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 SREBF1P36956 1147 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 NR1H3Q13133 447 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 Q4G0T1 1027 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 TTC25Q96NG3 672 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 KLHL11Q9NVR0 708 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 NID2Q14112 1375 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 ZNF662Q6ZS27 426 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 CYFIP1Q7L576 1253 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 GJD4Q96KN9 370 aaPredicted RBP18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 MYO3BQ8WXR4 1341 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 TAL1P17542 331 aaPredicted RBP18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 ARL4CP56559 192 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 ZBED8Q8IZ13 594 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 TMEM35BQ8NCS4 154 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 TTC16Q8NEE8 873 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 EHD4Q9H223 541 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 IP6K2Q9UHH9 426 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 F8VZ95 297 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 ITGA4P13612 1032 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 RAPGEF5Q92565 580 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 RNF146Q9NTX7 359 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 A0A0G2JND7 137 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 A6NJR5 290 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 CPP00450 1065 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 MARK3P27448 753 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 NPEPPSP55786 919 aa18.24■□□□□ 0.51
SMARCA4-215ENST00000590574 CFAP73A6NFT4 308 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 CALB1P05937 261 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 SLC1A1P43005 524 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 MAPK7Q13164 816 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 COG2Q14746 738 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 LRRC55Q6ZSA7 311 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 KCTD17Q8N5Z5 321 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 BTBD6Q96KE9 485 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 MED15Q96RN5 788 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 TRAIPQ9BWF2 469 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 CSADQ9Y600 493 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 AFF2P51816 1311 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 SHMT1P34896 483 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 SNRNP48Q6IEG0 339 aaKnown RBP18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 SPATA21Q7Z572 469 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 FAM118BQ9BPY3 351 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 ZSWIM1Q9BR11 485 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 MXRA8Q9BRK3 442 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 ADPGKQ9BRR6 497 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 SLC40A1Q9NP59 571 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 ITIH2P19823 946 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 COILP38432 576 aaPredicted RBP18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 PDIA2Q13087 525 aaKnown RBP18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 PLA2G4FQ68DD2 849 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 OR6B2Q6IFH4 312 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 RTKN2Q8IZC4 609 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 TMEM117Q9H0C3 514 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 A0A0A6YYK5 440 aaPredicted RBP18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 ENTPD3O75355 529 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 PSMC4P43686 418 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 ERVK-9P63128 1117 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 TTMPQ5BVD1 217 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 PCDHA10Q9Y5I2 948 aa18.23■□□□□ 0.51
SMARCA4-215ENST00000590574 CASZ1Q86V15 1759 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 IQANK1A0A1B0GTG1 560 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 RPAINQ86UA6 219 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 THNSL1Q8IYQ7 743 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 MSL3Q8N5Y2 521 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 PDCD7Q8N8D1 485 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 ETNK1Q9HBU6 452 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 KCNMA1Q12791 1236 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 PABPC3Q9H361 631 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 RBAKQ9NYW8 714 aaPredicted RBP18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 TTLL3Q9Y4R7 772 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 TBXAS1P24557 533 aaPredicted RBP18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 ARL1P40616 181 aaPredicted RBP18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 LRRC37BQ96QE4 947 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 SYNJ2BP-COX16A0A087WUM0 186 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 PRPSAP2O60256 369 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 EPC2Q52LR7 807 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 SYDE1Q6ZW31 735 aaPredicted RBP18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 NME8Q8N427 588 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 TTLL6Q8N841 843 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 NSUN6Q8TEA1 469 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 MAML1Q92585 1016 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 HEXIM2Q96MH2 286 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 MMTAG2Q9BU76 263 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 COX16Q9P0S2 106 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 AGO2Q9UKV8 859 aaKnown RBP18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 TRAF3IP3Q9Y228 551 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 PI4K2BG5E9Z4 385 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 SGPL1O95470 568 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 ARSEP51690 589 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 CDO1Q16878 200 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 BAP1Q92560 729 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 TTC17Q96AE7 1141 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 GBP5Q96PP8 586 aa18.22■□□□□ 0.51
SMARCA4-215ENST00000590574 MED1Q15648 1581 aaPredicted RBP18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 SETD1AO15047 1707 aaKnown RBP18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 MYO1EQ12965 1108 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 PPP1R16BQ96T49 567 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms