RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TMEM175Q9BSA9 504 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 TCHPQ9BT92 498 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 TMEM134Q9H6X4 195 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 C17orf75Q9HAS0 396 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 SNTG2Q9NY99 539 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 TFIP11Q9UBB9 837 aaKnown RBP13.3□□□□□ -0.28
TPM4-212ENST00000590180 CCDC39Q9UFE4 941 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 PRG3Q9Y2Y8 225 aaPredicted RBP13.3□□□□□ -0.28
TPM4-212ENST00000590180 SRPRBQ9Y5M8 271 aaKnown RBP13.3□□□□□ -0.28
TPM4-212ENST00000590180 UNC80Q8N2C7 3258 aa13.3□□□□□ -0.28
TPM4-212ENST00000590180 GRXCR2A6NFK2 248 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 TNFRSF10AO00220 468 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 NRP1O14786 923 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 B4GALT3O60512 393 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 EDN1P05305 212 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 PLS3P13797 630 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 IL9P15248 144 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 PLCG1P19174 1290 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 MAPK7Q13164 816 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 SMC1AQ14683 1233 aaKnown RBP13.29□□□□□ -0.28
TPM4-212ENST00000590180 STK38Q15208 465 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 DUSP6Q16828 381 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 ARSHQ5FYA8 562 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 USP49Q70CQ1 688 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 GPBP1Q86WP2 473 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 TMEM173Q86WV6 379 aaPredicted RBP13.29□□□□□ -0.28
TPM4-212ENST00000590180 COLGALT2Q8IYK4 626 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 MRPL43Q8N983 215 aaKnown RBP13.29□□□□□ -0.28
TPM4-212ENST00000590180 ZNF396Q96N95 335 aaPredicted RBP13.29□□□□□ -0.28
TPM4-212ENST00000590180 RPS6KC1Q96S38 1066 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 CDCA3Q99618 268 aaPredicted RBP13.29□□□□□ -0.28
TPM4-212ENST00000590180 COLEC11Q9BWP8 271 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 PANK2Q9BZ23 570 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 CCSER1Q9C0I3 900 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 ZHX3Q9H4I2 956 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 KCND2Q9NZV8 630 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 CD207Q9UJ71 328 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 FBXO2Q9UK22 296 aaPredicted RBP13.29□□□□□ -0.28
TPM4-212ENST00000590180 FAM50BQ9Y247 325 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 GDAQ9Y2T3 454 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 KIAA1671Q9BY89 1806 aa13.29□□□□□ -0.28
TPM4-212ENST00000590180 C2orf71A6NGG8 1288 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
TPM4-212ENST00000590180 DDIT3P35638 169 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 TXLNAP40222 546 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 STRN3Q13033 797 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 SLC39A14Q15043 492 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 DCAF4L1Q3SXM0 396 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 FOXD4L6Q3SYB3 417 aaPredicted RBP13.28□□□□□ -0.28
TPM4-212ENST00000590180 RRAGBQ5VZM2 374 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 LLGL2Q6P1M3 1020 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 FOXD4L3Q6VB84 417 aaPredicted RBP13.28□□□□□ -0.28
TPM4-212ENST00000590180 ZBTB33Q86T24 672 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 MYCT1Q8N699 235 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 KRI1Q8N9T8 703 aaKnown RBP13.28□□□□□ -0.28
TPM4-212ENST00000590180 BCL7CQ8WUZ0 217 aaPredicted RBP13.28□□□□□ -0.28
TPM4-212ENST00000590180 SPIRE2Q8WWL2 714 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 AUTS2Q8WXX7 1259 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 RAD54LQ92698 747 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 ACO2Q99798 780 aaKnown RBP13.28□□□□□ -0.28
TPM4-212ENST00000590180 NTPCRQ9BSD7 190 aaKnown RBP13.28□□□□□ -0.28
TPM4-212ENST00000590180 TARS2Q9BW92 718 aaKnown RBP13.28□□□□□ -0.28
TPM4-212ENST00000590180 MRPL4Q9BYD3 311 aaKnown RBP13.28□□□□□ -0.28
TPM4-212ENST00000590180 BLOC1S4Q9NUP1 217 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 CLEC1BQ9P126 229 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 LARSQ9P2J5 1176 aaKnown RBP13.28□□□□□ -0.28
TPM4-212ENST00000590180 BARX2Q9UMQ3 279 aaPredicted RBP13.28□□□□□ -0.28
TPM4-212ENST00000590180 TNFSF13BQ9Y275 285 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 PHLPP2Q6ZVD8 1323 aa13.28□□□□□ -0.28
TPM4-212ENST00000590180 INPPL1O15357 1258 aa13.27□□□□□ -0.29
TPM4-212ENST00000590180 TBX10O75333 385 aa13.27□□□□□ -0.29
TPM4-212ENST00000590180 FAM13AO94988 1023 aa13.27□□□□□ -0.29
TPM4-212ENST00000590180 SRGAP2BP0DMP2 458 aa13.27□□□□□ -0.29
TPM4-212ENST00000590180 CTSAP10619 480 aa13.27□□□□□ -0.29
TPM4-212ENST00000590180 OSTNP61366 133 aa13.27□□□□□ -0.29
TPM4-212ENST00000590180 RBM10P98175 930 aaKnown RBP13.27□□□□□ -0.29
TPM4-212ENST00000590180 GSTCDQ8NEC7 633 aa13.27□□□□□ -0.29
TPM4-212ENST00000590180 RABGGTAQ92696 567 aa13.27□□□□□ -0.29
TPM4-212ENST00000590180 ZBP1Q9H171 429 aa13.27□□□□□ -0.29
TPM4-212ENST00000590180 ARHGAP28Q9P2N2 729 aa13.27□□□□□ -0.29
TPM4-212ENST00000590180 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.29
TPM4-212ENST00000590180 PLXNA4Q9HCM2 1894 aa13.27□□□□□ -0.29
TPM4-212ENST00000590180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.26□□□□□ -0.29
TPM4-212ENST00000590180 FSD2A1L4K1 749 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 H0YCG3 227 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 MBTPS2O43462 519 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 CLASP2O75122 1294 aaKnown RBP13.26□□□□□ -0.29
TPM4-212ENST00000590180 TADA2AO75478 443 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 RECQL4O94761 1208 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 THP07101 528 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 ZSCAN22P10073 491 aaPredicted RBP13.26□□□□□ -0.29
TPM4-212ENST00000590180 HARSP12081 509 aaKnown RBP13.26□□□□□ -0.29
TPM4-212ENST00000590180 SSTR3P32745 418 aaPredicted RBP13.26□□□□□ -0.29
TPM4-212ENST00000590180 MATR3P43243 847 aaKnown RBP eCLIP13.26□□□□□ -0.29
TPM4-212ENST00000590180 DSC1Q08554 894 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 GRIK3Q13003 919 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 GIT2Q14161 759 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 ZNF568Q3ZCX4 644 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 TAS1R3Q7RTX0 852 aa13.26□□□□□ -0.29
TPM4-212ENST00000590180 FAM178BQ8IXR5 827 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms