RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 LAMA2P24043 3122 aaKnown RBP11.11□□□□□ -0.63
APOC1-205ENST00000589781 IGKV6-21A0A0C4DH24 114 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 SOWAHDA6NJG2 315 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 H0YCG3 227 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 TLR3O15455 904 aaKnown RBP11.1□□□□□ -0.63
APOC1-205ENST00000589781 GAS2O43903 313 aaKnown RBP11.1□□□□□ -0.63
APOC1-205ENST00000589781 C22orf31O95567 290 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 INSRRP14616 1297 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 CLCN1P35523 988 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 KRT9P35527 623 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 CHMP4BP1P59074 171 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 ADAM17P78536 824 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 APBA1Q02410 837 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 PTPN11Q06124 597 aaPredicted RBP11.1□□□□□ -0.63
APOC1-205ENST00000589781 KCNH2Q12809 1159 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 MBTPS1Q14703 1052 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 MTF1Q14872 753 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 NOLC1Q14978 699 aaKnown RBP eCLIP11.1□□□□□ -0.63
APOC1-205ENST00000589781 FAM47CQ5HY64 1035 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 ZNF484Q5JVG2 852 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 SLC9A9Q8IVB4 645 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 RDH13Q8NBN7 331 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 TCP11Q8WWU5 503 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 SLC35C1Q96A29 364 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 CCDC51Q96ER9 411 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 BORCS6Q96GS4 357 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 PPP1R16BQ96T49 567 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 CRACR2AQ9BSW2 395 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 SEZ6LQ9BYH1 1024 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 TTYH1Q9H313 450 aaPredicted RBP11.1□□□□□ -0.63
APOC1-205ENST00000589781 IL23AQ9NPF7 189 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 FAM207AQ9NSI2 230 aaPredicted RBP11.1□□□□□ -0.63
APOC1-205ENST00000589781 AGPAT5Q9NUQ2 364 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 SPTLC3Q9NUV7 552 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 CGNQ9P2M7 1197 aaKnown RBP11.1□□□□□ -0.63
APOC1-205ENST00000589781 ZNF215Q9UL58 517 aaPredicted RBP11.1□□□□□ -0.63
APOC1-205ENST00000589781 CAPN11Q9UMQ6 739 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 COL1A2P08123 1366 aa11.1□□□□□ -0.63
APOC1-205ENST00000589781 TRIP12Q14669 1992 aaPredicted RBP11.1□□□□□ -0.63
APOC1-205ENST00000589781 HNRNPDLO14979 420 aaKnown RBP11.09□□□□□ -0.63
APOC1-205ENST00000589781 ARHGAP6O43182 974 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 FECHP22830 423 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 ADSSP30520 456 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 LIG4P49917 911 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 PPP2R3AQ06190 1150 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 STRN3Q13033 797 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 MYBPC2Q14324 1141 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 PTGISQ16647 500 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 IER5Q5VY09 327 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 XXYLT1Q8NBI6 393 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 NEK11Q8NG66 645 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 PLEKHO2Q8TD55 490 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 PRPF31Q8WWY3 499 aaKnown RBP11.09□□□□□ -0.63
APOC1-205ENST00000589781 PSPC1Q8WXF1 523 aaKnown RBP11.09□□□□□ -0.63
APOC1-205ENST00000589781 JPH2Q9BR39 696 aaPredicted RBP11.09□□□□□ -0.63
APOC1-205ENST00000589781 NTPCRQ9BSD7 190 aaKnown RBP11.09□□□□□ -0.63
APOC1-205ENST00000589781 NUP58Q9BVL2 599 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 GANQ9H2C0 597 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 MTMR10Q9NXD2 777 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 TRMT1Q9NXH9 659 aaKnown RBP11.09□□□□□ -0.63
APOC1-205ENST00000589781 GCNT4Q9P109 453 aa11.09□□□□□ -0.63
APOC1-205ENST00000589781 SUCLA2Q9P2R7 463 aaPredicted RBP11.09□□□□□ -0.63
APOC1-205ENST00000589781 LUC7L2Q9Y383 392 aaKnown RBP11.09□□□□□ -0.63
APOC1-205ENST00000589781 ANK1P16157 1881 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 A0A1W2PQJ5 194 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 H3BRB1 525 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 NBNO60934 754 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 IQCF3P0C7M6 154 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 HARSP12081 509 aaKnown RBP11.08□□□□□ -0.64
APOC1-205ENST00000589781 ACTN1P12814 892 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 KRT13P13646 458 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 PBX2P40425 430 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 KCNJ6P48051 423 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 SNRPFP62306 86 aaKnown RBP11.08□□□□□ -0.64
APOC1-205ENST00000589781 DLG4P78352 724 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 MYL7Q01449 175 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 LAMTOR4Q0VGL1 99 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 BFSP1Q12934 665 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 PPIGQ13427 754 aaKnown RBP eCLIP11.08□□□□□ -0.64
APOC1-205ENST00000589781 GRIK4Q16099 956 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 BRDTQ58F21 947 aaPredicted RBP11.08□□□□□ -0.64
APOC1-205ENST00000589781 FIGNQ5HY92 759 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 E4F1Q66K89 784 aaPredicted RBP11.08□□□□□ -0.64
APOC1-205ENST00000589781 CDCA2Q69YH5 1023 aaPredicted RBP11.08□□□□□ -0.64
APOC1-205ENST00000589781 GPR153Q6NV75 609 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 EFCAB12Q6NXP0 572 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 PDXDC1Q6P996 788 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 RAD9BQ6WBX8 426 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 TOGARAM2Q6ZUX3 1019 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 RHPN2Q8IUC4 686 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 CBWD2Q8IUF1 395 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 CCAR2Q8N163 923 aaKnown RBP11.08□□□□□ -0.64
APOC1-205ENST00000589781 METTL13Q8N6R0 699 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 LINC01465Q8N7H1 131 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 RNF149Q8NC42 400 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 POMGNT1Q8WZA1 660 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 HERVK_113Q902F9 699 aa11.08□□□□□ -0.64
APOC1-205ENST00000589781 RNPC3Q96LT9 517 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms