RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 GIT1Q9Y2X7 761 aa11.7□□□□□ -0.54
CLPTM1-211ENST00000589347 FRYLO94915 3013 aa11.7□□□□□ -0.54
CLPTM1-211ENST00000589347 DNAH14Q0VDD8 3507 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 A0A087WWV3 80 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 VWA3AA6NCI4 1184 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 NT5C1B-RDH14C9J2C7 533 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 LIG1P18858 919 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 GTF2F1P35269 517 aaKnown RBP eCLIP11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 MLH1P40692 756 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 ERVFC1P60507 584 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 ADAM15Q13444 863 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 ZRSR1Q15695 479 aaKnown RBP11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 AMHR2Q16671 573 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 DDX53Q86TM3 631 aaKnown RBP11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 SMG8Q8ND04 991 aaKnown RBP11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 RASSF8Q8NHQ8 419 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 CASP10Q92851 521 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 CALML4Q96GE6 196 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 IGSF21Q96ID5 467 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 AK8Q96MA6 479 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 NXF3Q9H4D5 531 aaKnown RBP11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 NRDE2Q9H7Z3 1164 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 KCNG1Q9UIX4 513 aa11.69□□□□□ -0.54
CLPTM1-211ENST00000589347 NCOR2Q9Y618 2525 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 VWA8A3KMH1 1905 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 MEIS3P2A8K0S8 358 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 INPPL1O15357 1258 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 LINC01565O15544 149 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 B4GALT5O43286 388 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 POMCP01189 267 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 GALTP07902 379 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 SLC11A1P49279 550 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 DLX2Q07687 328 aaPredicted RBP11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 GRIK3Q13003 919 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 COASYQ13057 564 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 ECM1Q16610 540 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 INTS4Q96HW7 963 aaKnown RBP11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 ZBP1Q9H171 429 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 IRF2BPLQ9H1B7 796 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 C17orf75Q9HAS0 396 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 KCND2Q9NZV8 630 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 PARP2Q9UGN5 583 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 BARX2Q9UMQ3 279 aaPredicted RBP11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 SSX2IPQ9Y2D8 614 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 FAN1Q9Y2M0 1017 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 PCDHGC5Q9Y5F6 944 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 TCHHQ07283 1943 aa11.68□□□□□ -0.54
CLPTM1-211ENST00000589347 A0A1B0GUA9 196 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 C2orf71A6NGG8 1288 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 ARL5CA6NH57 179 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 PP2D1A8MPX8 630 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 E9PMD0 336 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 K7ELQ4 463 aaPredicted RBP11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 ACKR2O00590 384 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 PER2O15055 1255 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 ALDH2P05091 517 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 SSBP05455 408 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 URODP06132 367 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 CTSAP10619 480 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 OR1G1P47890 313 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 SCNN1GP51170 649 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 VCPP55072 806 aaKnown RBP11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 ZXDAP98168 799 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 CBX2Q14781 532 aaPredicted RBP11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 TPRNQ4KMQ1 711 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 HYIQ5T013 277 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 ELMSAN1Q6PJG2 1045 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 CABP7Q86V35 215 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 PPFIBP1Q86W92 1011 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 HSCBQ8IWL3 235 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 VPS52Q8N1B4 723 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 SMRP1Q8NCR6 262 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 BSNDQ8WZ55 320 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 MSLNLQ96KJ4 702 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 GAD1Q99259 594 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 HERC2P3Q9BVR0 1158 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 EMILIN2Q9BXX0 1053 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 CCDC113Q9H0I3 377 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 FZD8Q9H461 694 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 PDZD7Q9H5P4 517 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 DZANK1Q9NVP4 752 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 DNAJB4Q9UDY4 337 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 HES2Q9Y543 173 aa11.67□□□□□ -0.54
CLPTM1-211ENST00000589347 CCDC169A6NNP5 214 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 HIDE1A8MVS5 230 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 H0YCG3 227 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 HIP1RO75146 1068 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 CXCL14O95715 111 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 GLP2RO95838 553 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 HOXB8P17481 243 aaPredicted RBP11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 GUCY2CP25092 1073 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 LONP1P36776 959 aaKnown RBP11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 TXLNAP40222 546 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 UBA7P41226 1012 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 SMTNP53814 917 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 LLGL2Q6P1M3 1020 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 ASCL5Q7RTU5 278 aa11.66□□□□□ -0.54
CLPTM1-211ENST00000589347 ASIC4Q96FT7 647 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms