RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 MTIF3Q9H2K0 278 aaKnown RBP13.3□□□□□ -0.28
DNMT1-218ENST00000589294 SEMA6BQ9H3T3 888 aa13.3□□□□□ -0.28
DNMT1-218ENST00000589294 ELAC1Q9H777 363 aaKnown RBP13.3□□□□□ -0.28
DNMT1-218ENST00000589294 KIAA1586Q9HCI6 787 aa13.3□□□□□ -0.28
DNMT1-218ENST00000589294 UBN1Q9NPG3 1134 aa13.3□□□□□ -0.28
DNMT1-218ENST00000589294 FAM105AQ9NUU6 356 aa13.3□□□□□ -0.28
DNMT1-218ENST00000589294 RWDD2AQ9UIY3 292 aa13.3□□□□□ -0.28
DNMT1-218ENST00000589294 AGO2Q9UKV8 859 aaKnown RBP13.3□□□□□ -0.28
DNMT1-218ENST00000589294 PCDHB2Q9Y5E7 798 aa13.3□□□□□ -0.28
DNMT1-218ENST00000589294 ZMYM2Q9UBW7 1377 aa13.3□□□□□ -0.28
DNMT1-218ENST00000589294 SIP14410 1827 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-218ENST00000589294 BICDL2A1A5D9 508 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 SYCE3A1L190 88 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 OGTO15294 1046 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 NPTXRO95502 500 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 CAVIN2O95810 425 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 BMP8BP34820 402 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 MATR3P43243 847 aaKnown RBP eCLIP13.29□□□□□ -0.28
DNMT1-218ENST00000589294 PAK1Q13153 545 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 DPCR1Q3MIW9 517 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 ZNF568Q3ZCX4 644 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 ZCWPW2Q504Y3 356 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 ANKRD40Q6AI12 368 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 ARMCX5Q6P1M9 558 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 OTOP2Q7RTS6 562 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 ZBTB33Q86T24 672 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 CDR2LQ86X02 465 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-218ENST00000589294 ECHDC2Q86YB7 292 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 TET1Q8NFU7 2136 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 NELFBQ8WX92 580 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 LINC01599Q8WXQ3 324 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 GDF15Q99988 308 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
DNMT1-218ENST00000589294 MSTO1Q9BUK6 570 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 EIF2AQ9BY44 585 aaKnown RBP13.29□□□□□ -0.28
DNMT1-218ENST00000589294 NAT10Q9H0A0 1025 aaKnown RBP13.29□□□□□ -0.28
DNMT1-218ENST00000589294 CDT1Q9H211 546 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 IKZF4Q9H2S9 585 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 DMAC2Q9NW81 257 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 ANKFY1Q9P2R3 1169 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 TNRC18O15417 2968 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-218ENST00000589294 SCN5AQ14524 2016 aa13.29□□□□□ -0.28
DNMT1-218ENST00000589294 TISP43B9A030 160 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 AMHP03971 560 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 CLTAP09496 248 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 STAG3L1P0CL83 205 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 GRM5P41594 1212 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 KCNJ6P48051 423 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 FKBP3Q00688 224 aaKnown RBP13.28□□□□□ -0.28
DNMT1-218ENST00000589294 ADAM9Q13443 819 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 KLHL10Q6JEL2 608 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 ZNF598Q86UK7 904 aaKnown RBP13.28□□□□□ -0.28
DNMT1-218ENST00000589294 CRIPAKQ8N1N5 446 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 XXYLT1Q8NBI6 393 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 SMG8Q8ND04 991 aaKnown RBP13.28□□□□□ -0.28
DNMT1-218ENST00000589294 PHOSPHO2Q8TCD6 241 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 RSPH1Q8WYR4 309 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 TOP1MTQ969P6 601 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 FBXL18Q96ME1 805 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 CBWD1Q9BRT8 395 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 FUCA2Q9BTY2 467 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 CCDC94Q9BW85 323 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-218ENST00000589294 HAPLN2Q9GZV7 340 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 TMEM161AQ9NX61 479 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 HSPBP1Q9NZL4 362 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 IPPQ9Y573 584 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 PCDHB7Q9Y5E2 793 aa13.28□□□□□ -0.28
DNMT1-218ENST00000589294 PDE4DIPQ5VU43 2346 aa13.27□□□□□ -0.28
DNMT1-218ENST00000589294 CETN3O15182 167 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 CLIC2O15247 247 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 EXTL3O43909 919 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 FAM189A1O60320 539 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 FGFR1OPO95684 399 aaKnown RBP13.27□□□□□ -0.29
DNMT1-218ENST00000589294 NR3C1P04150 777 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 ITGA4P13612 1032 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 WDR5P61964 334 aaKnown RBP13.27□□□□□ -0.29
DNMT1-218ENST00000589294 RASIP1Q5U651 963 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 TTI2Q6NXR4 508 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.27□□□□□ -0.29
DNMT1-218ENST00000589294 NPAS4Q8IUM7 802 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 ACAP3Q96P50 834 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 UBE2OQ9C0C9 1292 aaKnown RBP13.27□□□□□ -0.29
DNMT1-218ENST00000589294 PCIF1Q9H4Z3 704 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 PLEKHA5Q9HAU0 1116 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 LRFN2Q9ULH4 789 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 GIT1Q9Y2X7 761 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 LTBP2Q14767 1821 aa13.27□□□□□ -0.29
DNMT1-218ENST00000589294 ZNF233A6NK53 670 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 MAPK13O15264 365 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 HOXA2O43364 376 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 EXOC3O60645 756 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 ADRB2P07550 413 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 NR2F2P24468 414 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 PMS1P54277 932 aaKnown RBP13.26□□□□□ -0.29
DNMT1-218ENST00000589294 YARSP54577 528 aaKnown RBP13.26□□□□□ -0.29
DNMT1-218ENST00000589294 CRELD2Q6UXH1 353 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-218ENST00000589294 ZC3H3Q8IXZ2 948 aaKnown RBP13.26□□□□□ -0.29
DNMT1-218ENST00000589294 THNSL1Q8IYQ7 743 aa13.26□□□□□ -0.29
DNMT1-218ENST00000589294 GPD1LQ8N335 351 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms