RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 GATMP50440 423 aa20.77■□□□□ 0.92
CLPTM1-209ENST00000588855 RABGGTBP53611 331 aa20.77■□□□□ 0.92
CLPTM1-209ENST00000588855 NOLC1Q14978 699 aaKnown RBP eCLIP20.77■□□□□ 0.92
CLPTM1-209ENST00000588855 MRPL10Q7Z7H8 261 aaKnown RBP20.77■□□□□ 0.92
CLPTM1-209ENST00000588855 CEP120Q8N960 986 aa20.77■□□□□ 0.92
CLPTM1-209ENST00000588855 APOL6Q9BWW8 343 aa20.77■□□□□ 0.92
CLPTM1-209ENST00000588855 RNF19AQ9NV58 838 aa20.77■□□□□ 0.92
CLPTM1-209ENST00000588855 KIAA1468Q9P260 1216 aa20.77■□□□□ 0.92
CLPTM1-209ENST00000588855 CHD9Q3L8U1 2897 aa20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 BIN1O00499 593 aa20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 CLDN3O15551 220 aa20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 EOMESO95936 686 aa20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 MCF2P10911 925 aa20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 MCL1Q07820 350 aa20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 ZNF658Q5TYW1 1059 aaPredicted RBP20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 ISM2Q6H9L7 571 aa20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 ZBED2Q9BTP6 218 aa20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 RNF39Q9H2S5 420 aa20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 RC3H2Q9HBD1 1191 aaKnown RBP20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 MAPK8IP1Q9UQF2 711 aa20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 CITO14578 2027 aa20.76■□□□□ 0.91
CLPTM1-209ENST00000588855 DGKIO75912 1065 aa20.75■□□□□ 0.91
CLPTM1-209ENST00000588855 ITGA4P13612 1032 aa20.75■□□□□ 0.91
CLPTM1-209ENST00000588855 CLLU1OSQ5K130 101 aa20.75■□□□□ 0.91
CLPTM1-209ENST00000588855 AGMOQ6ZNB7 445 aa20.75■□□□□ 0.91
CLPTM1-209ENST00000588855 APBB1IPQ7Z5R6 666 aaPredicted RBP20.75■□□□□ 0.91
CLPTM1-209ENST00000588855 PGBD4Q96DM1 585 aa20.75■□□□□ 0.91
CLPTM1-209ENST00000588855 RNF216Q9NWF9 866 aaPredicted RBP20.75■□□□□ 0.91
CLPTM1-209ENST00000588855 TRIP11Q15643 1979 aa20.75■□□□□ 0.91
CLPTM1-209ENST00000588855 TLL1O43897 1013 aa20.74■□□□□ 0.91
CLPTM1-209ENST00000588855 AKAP5P24588 427 aa20.74■□□□□ 0.91
CLPTM1-209ENST00000588855 ADSSP30520 456 aa20.74■□□□□ 0.91
CLPTM1-209ENST00000588855 HTRA4P83105 476 aaPredicted RBP20.74■□□□□ 0.91
CLPTM1-209ENST00000588855 HELQQ8TDG4 1101 aa20.74■□□□□ 0.91
CLPTM1-209ENST00000588855 GBP3Q9H0R5 595 aa20.74■□□□□ 0.91
CLPTM1-209ENST00000588855 SNTG2Q9NY99 539 aa20.74■□□□□ 0.91
CLPTM1-209ENST00000588855 STYXL1Q9Y6J8 313 aa20.74■□□□□ 0.91
CLPTM1-209ENST00000588855 KIAA1671Q9BY89 1806 aa20.74■□□□□ 0.91
CLPTM1-209ENST00000588855 A0A0B4J269 797 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 TGFB1I1O43294 461 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 MYOGP15173 224 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 BMP6P22004 513 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 PBX2P40425 430 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 GRM5P41594 1212 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 OSTNP61366 133 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 MORC3Q14149 939 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 KNOP1Q1ED39 458 aaKnown RBP20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 LRIT3Q3SXY7 679 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 SEZ6Q53EL9 994 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 TMEM192Q8IY95 271 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 THNSL1Q8IYQ7 743 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 HACE1Q8IYU2 909 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 POMGNT1Q8WZA1 660 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 ZNF689Q96CS4 500 aaPredicted RBP20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 YME1L1Q96TA2 773 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 RAD9AQ99638 391 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 MSTO1Q9BUK6 570 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 PBX4Q9BYU1 374 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 RALGAPA2Q2PPJ7 1873 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 TDRD15B5MCY1 1934 aaKnown RBP20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 LCHNA4D1U4 455 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 FAM189A1O60320 539 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 RECQL4O94761 1208 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 PTMSP20962 102 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 PRCPP42785 496 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 PAN2Q504Q3 1202 aaKnown RBP20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 ZBTB41Q5SVQ8 909 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 SLFN12LQ6IEE8 588 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 GUF1Q8N442 669 aaKnown RBP20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 CBWD1Q9BRT8 395 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 KCTD10Q9H3F6 313 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 RSAD1Q9HA92 442 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 TMEM63CQ9P1W3 806 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 PARP2Q9UGN5 583 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 YBX2Q9Y2T7 364 aaKnown RBP20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 INSL6Q9Y581 213 aa20.73■□□□□ 0.91
CLPTM1-209ENST00000588855 CHD7Q9P2D1 2997 aa20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 TBKBP1A7MCY6 615 aa20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 HOXA2O43364 376 aa20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 ARMCX5Q6P1M9 558 aa20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 CASD1Q96PB1 797 aa20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 TMEM117Q9H0C3 514 aa20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 AGPAT3Q9NRZ7 376 aa20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 KLK14Q9P0G3 267 aa20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 AGO2Q9UKV8 859 aaKnown RBP20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 INPP5FQ9Y2H2 1132 aa20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 PCDHA11Q9Y5I1 949 aa20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 ANK1P16157 1881 aa20.72■□□□□ 0.91
CLPTM1-209ENST00000588855 PDCD11Q14690 1871 aaKnown RBP20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 NLRC5Q86WI3 1866 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 OGTO15294 1046 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 OFD1O75665 1012 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 KIF20AO95235 890 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 GARTP22102 1010 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 MLH1P40692 756 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 TNFSF9P41273 254 aa20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 AFF1P51825 1210 aaKnown RBP20.71■□□□□ 0.91
CLPTM1-209ENST00000588855 SMAD3P84022 425 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms