RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 C17orf50Q8WW18 174 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 XPO6Q96QU8 1125 aaKnown RBP13.04□□□□□ -0.32
LRFN3-204ENST00000588831 TTC1Q99614 292 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 SPZ1Q9BXG8 430 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 RTFDC1Q9BY42 306 aaPredicted RBP13.04□□□□□ -0.32
LRFN3-204ENST00000588831 ADAMTSL3P82987 1691 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 ALOX15P16050 662 aaPredicted RBP13.04□□□□□ -0.32
LRFN3-204ENST00000588831 TMED10P49755 219 aaKnown RBP13.04□□□□□ -0.32
LRFN3-204ENST00000588831 SKOR1P84550 965 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 MCL1Q07820 350 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 ASTE1Q2TB18 679 aaPredicted RBP13.04□□□□□ -0.32
LRFN3-204ENST00000588831 YTHDF3Q7Z739 585 aaKnown RBP13.04□□□□□ -0.32
LRFN3-204ENST00000588831 PIP4K2CQ8TBX8 421 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 C1orf54Q8WWF1 131 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 KRT35Q92764 455 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 CAVIN3Q969G5 261 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 ANO3Q9BYT9 981 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 DHX36Q9H2U1 1008 aaKnown RBP13.04□□□□□ -0.32
LRFN3-204ENST00000588831 TDRKHQ9Y2W6 561 aaKnown RBP13.04□□□□□ -0.32
LRFN3-204ENST00000588831 IVNS1ABPQ9Y6Y0 642 aa13.04□□□□□ -0.32
LRFN3-204ENST00000588831 SSU72P8A0A1W2PR75 194 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 DDX3XO00571 662 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■■■■■ 37.8
LRFN3-204ENST00000588831 KRT16P08779 473 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 VIL1P09327 827 aaKnown RBP13.03□□□□□ -0.32
LRFN3-204ENST00000588831 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
LRFN3-204ENST00000588831 HIPK4Q8NE63 616 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.03□□□□□ -0.32
LRFN3-204ENST00000588831 CENPKQ9BS16 269 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 HEMGNQ9BXL5 484 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 NACA2Q9H009 215 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 TRPM3Q9HCF6 1732 aaPredicted RBP13.03□□□□□ -0.32
LRFN3-204ENST00000588831 HOMER2Q9NSB8 354 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 TSKSQ9UJT2 592 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 RBMX2Q9Y388 322 aaKnown RBP13.03□□□□□ -0.32
LRFN3-204ENST00000588831 TMEM150BA6NC51 233 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 TCP11X1B4DZS4 312 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 ZSCAN9O15535 394 aaPredicted RBP13.03□□□□□ -0.32
LRFN3-204ENST00000588831 GCLMP48507 274 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 CLCN2P51788 898 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 ARSHQ5FYA8 562 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 PRR5LQ6MZQ0 368 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 PPP1R18Q6NYC8 613 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 TLDC1Q6P9B6 456 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 UTS2BQ765I0 119 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 FAM186BQ8IYM0 893 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 TEX9Q8N6V9 391 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 SLC30A5Q8TAD4 765 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 KAT5Q92993 513 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 SYT15Q9BQS2 421 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 CTNNAL1Q9UBT7 734 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 USP20Q9Y2K6 914 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 RBAK-RBAKDNI3L0D1 243 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 EDIL3O43854 480 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 ATP9AO75110 1047 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 TRPA1O75762 1119 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 MLH1P40692 756 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 FIGNQ5HY92 759 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 UCMAQ8WVF2 138 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 ISCUQ9H1K1 167 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 UBE2TQ9NPD8 197 aaPredicted RBP13.03□□□□□ -0.32
LRFN3-204ENST00000588831 ARHGEF38Q9NXL2 777 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 SERPINB13Q9UIV8 391 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 SUGT1Q9Y2Z0 365 aa13.03□□□□□ -0.32
LRFN3-204ENST00000588831 TCRBV7S2A1N4TA0A589 114 aa13.02□□□□□ -0.32
LRFN3-204ENST00000588831 MAP3K7O43318 606 aa13.02□□□□□ -0.32
LRFN3-204ENST00000588831 ZFXP17010 805 aaPredicted RBP13.02□□□□□ -0.32
LRFN3-204ENST00000588831 USP11P51784 963 aa13.02□□□□□ -0.32
LRFN3-204ENST00000588831 C6orf163Q5TEZ5 329 aa13.02□□□□□ -0.32
LRFN3-204ENST00000588831 WDR60Q8WVS4 1066 aa13.02□□□□□ -0.32
LRFN3-204ENST00000588831 DNAJC1Q96KC8 554 aaKnown RBP13.02□□□□□ -0.32
LRFN3-204ENST00000588831 CEP63Q96MT8 703 aa13.02□□□□□ -0.32
LRFN3-204ENST00000588831 TMEM237Q96Q45 408 aa13.02□□□□□ -0.32
LRFN3-204ENST00000588831 NKIRAS1Q9NYS0 192 aa13.02□□□□□ -0.32
LRFN3-204ENST00000588831 ASIC3Q9UHC3 531 aa13.02□□□□□ -0.32
LRFN3-204ENST00000588831 USTQ9Y2C2 406 aa13.02□□□□□ -0.32
LRFN3-204ENST00000588831 XRCC4Q13426 336 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 KNOP1Q1ED39 458 aaKnown RBP13.02□□□□□ -0.33
LRFN3-204ENST00000588831 C6orf183Q5T699 404 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 IRF2BP2Q7Z5L9 587 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 PPM1KQ8N3J5 372 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 ATG4AQ8WYN0 398 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 PNMA3Q9UL41 463 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 MYH3P11055 1940 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 PNMA6FA0A0J9YX94 578 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 ANKRD33BA6NCL7 494 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 ADCY3O60266 1144 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 MGRN1O60291 552 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 TUBP50607 506 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 GALK1P51570 392 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 SLFN13Q68D06 897 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 JDP2Q8WYK2 163 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 LZTS2Q9BRK4 669 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 MAGEF1Q9HAY2 307 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 DOLKQ9UPQ8 538 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 DAGLAQ9Y4D2 1042 aa13.02□□□□□ -0.33
LRFN3-204ENST00000588831 GLI3P10071 1580 aa13.01□□□□□ -0.33
LRFN3-204ENST00000588831 LRP6O75581 1613 aa13.01□□□□□ -0.33
LRFN3-204ENST00000588831 TTLL1O95922 423 aa13.01□□□□□ -0.33
LRFN3-204ENST00000588831 TARSP26639 723 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms