RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 SPG21Q9NZD8 308 aa20.65■□□□□ 0.9
ERCC1-207ENST00000588738 ZMYM2Q9UBW7 1377 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 INPPL1O15357 1258 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 POMCP01189 267 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 MLH1P40692 756 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 AFF1P51825 1210 aaKnown RBP20.64■□□□□ 0.89
ERCC1-207ENST00000588738 PLCB3Q01970 1234 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 KRT17Q04695 432 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 SKIV2LQ15477 1246 aaKnown RBP20.64■□□□□ 0.89
ERCC1-207ENST00000588738 SLC17A8Q8NDX2 589 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 POF1BQ8WVV4 589 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 KCNN1Q92952 543 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 DHX58Q96C10 678 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 TCHPQ9BT92 498 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 NRDE2Q9H7Z3 1164 aa20.64■□□□□ 0.89
ERCC1-207ENST00000588738 PUF60Q9UHX1 559 aaKnown RBP20.64■□□□□ 0.89
ERCC1-207ENST00000588738 K7ENM7 598 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 POLR2DO15514 142 aaKnown RBP20.63■□□□□ 0.89
ERCC1-207ENST00000588738 PBX3P40426 434 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 AMPD3Q01432 767 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 E2F4Q16254 413 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 ADALQ6DHV7 355 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 ZPBP2Q6X784 338 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 ZNF280BQ86YH2 543 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 DNAJC19Q96DA6 116 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 CHAMP1Q96JM3 812 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 ZFP42Q96MM3 310 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 PYM1Q9BRP8 204 aaKnown RBP20.63■□□□□ 0.89
ERCC1-207ENST00000588738 TNMDQ9H2S6 317 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 NSUN3Q9H649 340 aaKnown RBP20.63■□□□□ 0.89
ERCC1-207ENST00000588738 PTPRHQ9HD43 1115 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 SNTG2Q9NY99 539 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 SEL1LQ9UBV2 794 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 LZTS1Q9Y250 596 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 ATG2AQ2TAZ0 1938 aa20.63■□□□□ 0.89
ERCC1-207ENST00000588738 ALDH2P05091 517 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 IDEP14735 1019 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 GAP43P17677 238 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 DNAJB1P25685 340 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 SCNN1GP51170 649 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 CAMK1Q14012 370 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 ZNF568Q3ZCX4 644 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 MPZL3Q6UWV2 235 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 SLC39A11Q8N1S5 342 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 MRPS27Q92552 414 aaKnown RBP20.62■□□□□ 0.89
ERCC1-207ENST00000588738 BICD1Q96G01 975 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 RPS6KC1Q96S38 1066 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 KBTBD4Q9NVX7 518 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 KLK14Q9P0G3 267 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 DNAJB4Q9UDY4 337 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 TBX20Q9UMR3 447 aa20.62■□□□□ 0.89
ERCC1-207ENST00000588738 NT5C1B-RDH14C9J2C7 533 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 TOM1L1O75674 476 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 DDHD2O94830 711 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 GALTP07902 379 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 MCF2P10911 925 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 PROZP22891 400 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 CMA1P23946 247 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 NMT1P30419 496 aaKnown RBP20.61■□□□□ 0.89
ERCC1-207ENST00000588738 ZBTB33Q86T24 672 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 SFR1Q86XK3 245 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 MICAL1Q8TDZ2 1067 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 STAMQ92783 540 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 TMEM169Q96HH4 297 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 FIZ1Q96SL8 496 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 TMEM175Q9BSA9 504 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 CDT1Q9H211 546 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 MAGEF1Q9HAY2 307 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 TLR9Q9NR96 1032 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 MIOSQ9NXC5 875 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 KCNH3Q9ULD8 1083 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 GDAQ9Y2T3 454 aa20.61■□□□□ 0.89
ERCC1-207ENST00000588738 CLDN3O15551 220 aa20.6■□□□□ 0.89
ERCC1-207ENST00000588738 RECQL4O94761 1208 aa20.6■□□□□ 0.89
ERCC1-207ENST00000588738 CSPG5O95196 566 aa20.6■□□□□ 0.89
ERCC1-207ENST00000588738 GTF2BQ00403 316 aa20.6■□□□□ 0.89
ERCC1-207ENST00000588738 HERC4Q5GLZ8 1057 aaPredicted RBP20.6■□□□□ 0.89
ERCC1-207ENST00000588738 PDE12Q6L8Q7 609 aaKnown RBP20.6■□□□□ 0.89
ERCC1-207ENST00000588738 GSTCDQ8NEC7 633 aa20.6■□□□□ 0.89
ERCC1-207ENST00000588738 PPP2R3CQ969Q6 453 aa20.6■□□□□ 0.89
ERCC1-207ENST00000588738 CCDC94Q9BW85 323 aaPredicted RBP20.6■□□□□ 0.89
ERCC1-207ENST00000588738 ST6GALNAC4Q9H4F1 302 aa20.6■□□□□ 0.89
ERCC1-207ENST00000588738 MRPL44Q9H9J2 332 aaKnown RBP20.6■□□□□ 0.89
ERCC1-207ENST00000588738 PANK4Q9NVE7 773 aa20.6■□□□□ 0.89
ERCC1-207ENST00000588738 FAN1Q9Y2M0 1017 aa20.6■□□□□ 0.89
ERCC1-207ENST00000588738 NR1I2O75469 434 aa20.59■□□□□ 0.89
ERCC1-207ENST00000588738 ANP32AP39687 249 aaKnown RBP20.59■□□□□ 0.89
ERCC1-207ENST00000588738 GRM5P41594 1212 aa20.59■□□□□ 0.89
ERCC1-207ENST00000588738 MATR3P43243 847 aaKnown RBP eCLIP20.59■□□□□ 0.89
ERCC1-207ENST00000588738 SLC11A1P49279 550 aa20.59■□□□□ 0.89
ERCC1-207ENST00000588738 LIG4P49917 911 aa20.59■□□□□ 0.89
ERCC1-207ENST00000588738 YARSP54577 528 aaKnown RBP20.59■□□□□ 0.89
ERCC1-207ENST00000588738 GRIK3Q13003 919 aa20.59■□□□□ 0.89
ERCC1-207ENST00000588738 TCEAL5Q5H9L2 206 aa20.59■□□□□ 0.89
ERCC1-207ENST00000588738 ZNF720Q7Z2F6 126 aa20.59■□□□□ 0.89
ERCC1-207ENST00000588738 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.59■□□□□ 0.89
ERCC1-207ENST00000588738 CCDC65Q8IXS2 484 aa20.59■□□□□ 0.89
ERCC1-207ENST00000588738 COLGALT2Q8IYK4 626 aa20.59■□□□□ 0.89
ERCC1-207ENST00000588738 IGSF21Q96ID5 467 aa20.59■□□□□ 0.89
ERCC1-207ENST00000588738 ZBTB45Q96K62 511 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms