RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 USP25Q9UHP3 1055 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 RWDD3Q9Y3V2 267 aa22.18■■□□□ 1.14
DDX39A-207ENST00000588542 INPPL1O15357 1258 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 PPP1R37O75864 691 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 AKAP5P24588 427 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 AFMP43652 599 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 COASYQ13057 564 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 DCAF4L1Q3SXM0 396 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 NOMO2Q5JPE7 1267 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 ZPBP2Q6X784 338 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 CCDC65Q8IXS2 484 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 SLC17A8Q8NDX2 589 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 RSPH1Q8WYR4 309 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 PAGE5Q96GU1 130 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 IPO9Q96P70 1041 aaKnown RBP22.17■■□□□ 1.14
DDX39A-207ENST00000588542 FGFBP2Q9BYJ0 223 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 BLZF1Q9H2G9 400 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 UBN1Q9NPG3 1134 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 TBC1D7Q9P0N9 293 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 INPP5FQ9Y2H2 1132 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 GIT1Q9Y2X7 761 aa22.17■■□□□ 1.14
DDX39A-207ENST00000588542 PDCD11Q14690 1871 aaKnown RBP22.16■■□□□ 1.14
DDX39A-207ENST00000588542 H3BNC9 293 aa22.16■■□□□ 1.14
DDX39A-207ENST00000588542 PIGRP01833 764 aa22.16■■□□□ 1.14
DDX39A-207ENST00000588542 RB1P06400 928 aa22.16■■□□□ 1.14
DDX39A-207ENST00000588542 ASIC1P78348 528 aa22.16■■□□□ 1.14
DDX39A-207ENST00000588542 CUL4BQ13620 913 aa22.16■■□□□ 1.14
DDX39A-207ENST00000588542 MPZL3Q6UWV2 235 aa22.16■■□□□ 1.14
DDX39A-207ENST00000588542 MAP4K3Q8IVH8 894 aa22.16■■□□□ 1.14
DDX39A-207ENST00000588542 MRPL9Q9BYD2 267 aaKnown RBP22.16■■□□□ 1.14
DDX39A-207ENST00000588542 HAPLN2Q9GZV7 340 aa22.16■■□□□ 1.14
DDX39A-207ENST00000588542 MRPL44Q9H9J2 332 aaKnown RBP22.16■■□□□ 1.14
DDX39A-207ENST00000588542 TBC1D13Q9NVG8 400 aa22.16■■□□□ 1.14
DDX39A-207ENST00000588542 MIOSQ9NXC5 875 aa22.16■■□□□ 1.14
DDX39A-207ENST00000588542 SNTG2Q9NY99 539 aa22.16■■□□□ 1.14
DDX39A-207ENST00000588542 PRRC2BQ5JSZ5 2229 aaKnown RBP22.16■■□□□ 1.14
DDX39A-207ENST00000588542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.15■■□□□ 1.14
DDX39A-207ENST00000588542 ARL5CA6NH57 179 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 TOM1L1O75674 476 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 ABCD1P33897 745 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 MLH1P40692 756 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 CASP5P51878 434 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 ZNF568Q3ZCX4 644 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 SPOUT1Q5T280 376 aaKnown RBP22.15■■□□□ 1.14
DDX39A-207ENST00000588542 HACE1Q8IYU2 909 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 CEP120Q8N960 986 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 COLGALT1Q8NBJ5 622 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 GSTCDQ8NEC7 633 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 ZFP42Q96MM3 310 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 GAD1Q99259 594 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 GAS2L1Q99501 681 aaPredicted RBP22.15■■□□□ 1.14
DDX39A-207ENST00000588542 PLVAPQ9BX97 442 aa22.15■■□□□ 1.14
DDX39A-207ENST00000588542 ZMYM2Q9UBW7 1377 aa22.14■■□□□ 1.14
DDX39A-207ENST00000588542 B4GALT3O60512 393 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 ZNF202O95125 648 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 MYBP10242 640 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 MCF2P10911 925 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 POU3F3P20264 500 aaPredicted RBP22.14■■□□□ 1.13
DDX39A-207ENST00000588542 EHHADHQ08426 723 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 GPM6BQ13491 265 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 SLC39A4Q6P5W5 647 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 UNC13DQ70J99 1090 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 ZBTB33Q86T24 672 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 ZNF280BQ86YH2 543 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 FMR1NBQ8N0W7 255 aaPredicted RBP22.14■■□□□ 1.13
DDX39A-207ENST00000588542 URGCPQ8TCY9 931 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 P2RX5Q93086 422 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 HPS3Q969F9 1004 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 HVCN1Q96D96 273 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 CXCL16Q9H2A7 254 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 IKZF4Q9H2S9 585 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 NRDE2Q9H7Z3 1164 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 KLK14Q9P0G3 267 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 PARP2Q9UGN5 583 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 STXBP5LQ9Y2K9 1186 aa22.14■■□□□ 1.13
DDX39A-207ENST00000588542 GOLGA6L4A6NEF3 574 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 KLRC4O43908 158 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 RECQL4O94761 1208 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 DDHD2O94830 711 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 POMCP01189 267 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 FOSL2P15408 326 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 LAG3P18627 525 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 PBX3P40426 434 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 SCNN1GP51170 649 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 MCL1Q07820 350 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 KCNA1Q09470 495 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 SNW1Q13573 536 aaKnown RBP22.13■■□□□ 1.13
DDX39A-207ENST00000588542 KRBA2Q6ZNG9 492 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 APBB1IPQ7Z5R6 666 aaPredicted RBP22.13■■□□□ 1.13
DDX39A-207ENST00000588542 KLHL23Q8NBE8 558 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 GLIS3Q8NEA6 775 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 ENGASEQ8NFI3 743 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 BICD1Q96G01 975 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 TCHPQ9BT92 498 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 C11orf84Q9BUA3 381 aaPredicted RBP22.13■■□□□ 1.13
DDX39A-207ENST00000588542 ANKFY1Q9P2R3 1169 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 GDAQ9Y2T3 454 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 MTCH2Q9Y6C9 303 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 ANK1P16157 1881 aa22.13■■□□□ 1.13
DDX39A-207ENST00000588542 ANKRD63C9JTQ0 380 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms