RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 TMEM62Q0P6H9 643 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 LRMPQ12912 555 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 NOLC1Q14978 699 aaKnown RBP eCLIP12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 PSMD6Q15008 389 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ZBTB41Q5SVQ8 909 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 PPFIBP1Q86W92 1011 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 SLC43A3Q8NBI5 491 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ARRDC4Q8NCT1 418 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 PARD3BQ8TEW8 1205 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ZNF830Q96NB3 372 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 SCLT1Q96NL6 688 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 FAM213AQ9BRX8 229 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CDT1Q9H211 546 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 PDZD7Q9H5P4 517 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CDHR5Q9HBB8 845 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CAPN11Q9UMQ6 739 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ZKSCAN5Q9Y2L8 839 aa12.98□□□□□ -0.33
TNFRSF11A-203ENST00000587697 A0A1W2PQ45 241 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 A0A1W2PQY0 241 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TTC26A0AVF1 554 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ZNF233A6NK53 670 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 LRRIQ3A6PVS8 624 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 AKR1B15C9JRZ8 316 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 EPHB6O15197 1021 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 OGTO15294 1046 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 P4HA2O15460 535 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 N4BP1O75113 896 aaKnown RBP12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CSDE1O75534 798 aaKnown RBP12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 NOL4O94818 638 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 MCF2P10911 925 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ARF4P18085 180 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 FECHP22830 423 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CRYBB1P53674 252 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CLDN10P78369 228 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 MRPS6P82932 125 aaKnown RBP12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 PPP3CAQ08209 521 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 GOLGA8FQ08AF8 430 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 GOLGA8DPQ0D2H9 430 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ITGA7Q13683 1181 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 SNX17Q15036 470 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ZNF568Q3ZCX4 644 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 SLC9C1Q4G0N8 1177 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CBWD6Q4V339 395 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 FAM47CQ5HY64 1035 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CBWD3Q5JTY5 395 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CBWD5Q5RIA9 395 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TMEM139Q8IV31 216 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CNGA4Q8IV77 575 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 BRSK2Q8IWQ3 736 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 WNT8BQ93098 351 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CCDC51Q96ER9 411 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 PANX2Q96RD6 677 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 OSMRQ99650 979 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 EDEM3Q9BZQ6 932 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 GANQ9H2C0 597 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TMX1Q9H3N1 280 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 PLCB1Q9NQ66 1216 aa12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CPSF3Q9UKF6 684 aaKnown RBP12.97□□□□□ -0.33
TNFRSF11A-203ENST00000587697 HTTP42858 3142 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 A0A1B0GUA9 196 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 DNM1LO00429 736 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 STX10O60499 249 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ERLIN2O94905 339 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TPM1P09493 284 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CCL5P13501 91 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TRIM21P19474 475 aaKnown RBP12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 EIF4BP23588 611 aaKnown RBP12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 GTF2H1P32780 548 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 MATR3P43243 847 aaKnown RBP eCLIP12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ACOT2P49753 483 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ADKP55263 362 aaKnown RBP12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 WNT7BP56706 349 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 MYL7Q01449 175 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 MGAT3Q09327 533 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 MTFR1Q15390 333 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 EPC2Q52LR7 807 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 GBP6Q6ZN66 633 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 C15orf39Q6ZRI6 1047 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CTU1Q7Z7A3 348 aaKnown RBP12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 ZBTB33Q86T24 672 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 USP37Q86T82 979 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CCDC112Q8NEF3 446 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 NEK11Q8NG66 645 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TMEM40Q8WWA1 233 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 PCMTD1Q96MG8 357 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 GLT1D1Q96MS3 346 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 DNAJC7Q99615 494 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 LSM14BQ9BX40 385 aaKnown RBP12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 CELF4Q9BZC1 486 aaKnown RBP12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 MMRN2Q9H8L6 949 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 SIX2Q9NPC8 291 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 RBAKQ9NYW8 714 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 GCNT4Q9P109 453 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TRPV2Q9Y5S1 764 aa12.96□□□□□ -0.33
TNFRSF11A-203ENST00000587697 TDRD15B5MCY1 1934 aaKnown RBP12.96□□□□□ -0.34
TNFRSF11A-203ENST00000587697 A0A0U1RQG5 324 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF11A-203ENST00000587697 HARSP12081 509 aaKnown RBP12.95□□□□□ -0.34
TNFRSF11A-203ENST00000587697 SLC9A1P19634 815 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms