RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 CTSHP09668 335 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 IQCF3P0C7M6 154 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 ZNF18P17022 549 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 EN2P19622 333 aaPredicted RBP11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 ADSSP30520 456 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 MRE11P49959 708 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 AP3M2P53677 418 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 STX17P56962 302 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 LPIN1Q14693 890 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 NCAPHQ15003 741 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 LRRC26Q2I0M4 334 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 FILIP1LQ4L180 1135 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 LUZP1Q86V48 1076 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 FAM228AQ86W67 206 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 NT5DC4Q86YG4 428 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 RPUSD2Q8IZ73 545 aaKnown RBP11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 TMEM199Q8N511 208 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 SEPT8Q92599 483 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 WNT8BQ93098 351 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 IFIH1Q9BYX4 1025 aaKnown RBP11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 PDZD7Q9H5P4 517 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 PLEKHA5Q9HAU0 1116 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 ERVK-5Q9HDB9 667 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 UBN1Q9NPG3 1134 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 TOPORSQ9NS56 1045 aaPredicted RBP11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 ANKFY1Q9P2R3 1169 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 ARMCX3Q9UH62 379 aaPredicted RBP11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 PADI3Q9ULW8 664 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 ST3GAL5Q9UNP4 418 aa11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 PIN4Q9Y237 131 aaKnown RBP11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 NOC2LQ9Y3T9 749 aaKnown RBP11.28□□□□□ -0.6
CLPTM1-207ENST00000587537 FSD2A1L4K1 749 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 TRIM49BA6NDI0 452 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 N4BP1O75113 896 aaKnown RBP11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 ZNF623O75123 536 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 CXCL10P02778 98 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 HOXA11P31270 313 aaPredicted RBP11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 GRM5P41594 1212 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 PMS1P54277 932 aaKnown RBP11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 SNRNP35Q16560 246 aaKnown RBP11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 CCDC40Q4G0X9 1142 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 TCP11X2Q5H9J9 407 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 SMYD5Q6GMV2 418 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 SLC39A4Q6P5W5 647 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 TRAF7Q6Q0C0 670 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 SARM1Q6SZW1 724 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 FAM186BQ8IYM0 893 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 TMC2Q8TDI7 906 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 PPP1R13LQ8WUF5 828 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 TMEM40Q8WWA1 233 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 ANP32BQ92688 251 aaKnown RBP11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 PGBD4Q96DM1 585 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 PPP1R16BQ96T49 567 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 CCDC94Q9BW85 323 aaPredicted RBP11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 ASB7Q9H672 318 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 FANCLQ9NW38 375 aa11.27□□□□□ -0.61
CLPTM1-207ENST00000587537 KCNJ18B7U540 433 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 ANKRD63C9JTQ0 380 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 ABLIM1O14639 778 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 CLIC2O15247 247 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 PMM2O15305 246 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 EOMESO95936 686 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 GHRP10912 638 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 RAG1P15918 1043 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 GTF2H1P32780 548 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 MTIF2P46199 727 aaKnown RBP11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 CYP2J2P51589 502 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 YARSP54577 528 aaKnown RBP11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 CETN1Q12798 172 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 NFX1Q12986 1120 aaKnown RBP11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 KCNJ12Q14500 433 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 MAN2A1Q16706 1144 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 PLEKHG4Q58EX7 1191 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 CEP135Q66GS9 1140 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 TWF2Q6IBS0 349 aaKnown RBP11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 MFSD5Q6N075 450 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 GAS2L3Q86XJ1 694 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 CNOT6LQ96LI5 555 aaKnown RBP11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 MED15Q96RN5 788 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 CBWD1Q9BRT8 395 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 RBSNQ9H1K0 784 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 CDT1Q9H211 546 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 LIMA1Q9UHB6 759 aaKnown RBP11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 DERAQ9Y315 318 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 DAAM1Q9Y4D1 1078 aa11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLPTM1-207ENST00000587537 RALGAPA2Q2PPJ7 1873 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 CITO14578 2027 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 A0A0U1RQF3 1178 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 CARNS1A5YM72 827 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 P4HA2O15460 535 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 B4GALT5O43286 388 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 HOXA2O43364 376 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 XPOTO43592 962 aaKnown RBP11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 AKAP3O75969 853 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 BAIAP3O94812 1187 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 SERPINC1P01008 464 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 ADRB2P07550 413 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 ACTN1P12814 892 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms