RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 NCOR1O75376 2440 aa9.51□□□□□ -0.89
ATG4D-202ENST00000585437 NCK2O43639 380 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 ZC3H11AO75152 810 aaKnown RBP eCLIP9.5□□□□□ -0.89
ATG4D-202ENST00000585437 PPP6R2O75170 966 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 DDHD2O94830 711 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 YEATS4O95619 227 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 GLP2RO95838 553 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 GALTP07902 379 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 PLS3P13797 630 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 PROZP22891 400 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 MARCKSP29966 332 aaPredicted RBP9.5□□□□□ -0.89
ATG4D-202ENST00000585437 SLC11A1P49279 550 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 NCKAP1LP55160 1127 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 SKIV2LQ15477 1246 aaKnown RBP9.5□□□□□ -0.89
ATG4D-202ENST00000585437 ZRSR1Q15695 479 aaKnown RBP9.5□□□□□ -0.89
ATG4D-202ENST00000585437 NAB2Q15742 525 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 NT5DC1Q5TFE4 455 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
ATG4D-202ENST00000585437 ZNF280BQ86YH2 543 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 COLGALT2Q8IYK4 626 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 HACE1Q8IYU2 909 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 RNF168Q8IYW5 571 aaPredicted RBP9.5□□□□□ -0.89
ATG4D-202ENST00000585437 TMEM161BQ8NDZ6 487 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 FOXD4L4Q8WXT5 416 aaPredicted RBP9.5□□□□□ -0.89
ATG4D-202ENST00000585437 LARP4BQ92615 738 aaKnown RBP9.5□□□□□ -0.89
ATG4D-202ENST00000585437 SYMPKQ92797 1274 aaKnown RBP9.5□□□□□ -0.89
ATG4D-202ENST00000585437 IGSF21Q96ID5 467 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 CLIC6Q96NY7 704 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 FIZ1Q96SL8 496 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 REEP2Q9BRK0 252 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 TMEM175Q9BSA9 504 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 VN1R3Q9BXE9 311 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 TRIM6Q9C030 488 aaPredicted RBP9.5□□□□□ -0.89
ATG4D-202ENST00000585437 ZBP1Q9H171 429 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 KMT5AQ9NQR1 393 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 STK17AQ9UEE5 414 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 TNFSF13BQ9Y275 285 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 INPP5FQ9Y2H2 1132 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 PCDHGC5Q9Y5F6 944 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 IRAK3Q9Y616 596 aa9.5□□□□□ -0.89
ATG4D-202ENST00000585437 A0A087X0B3 334 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 NPHP3-ACAD11A0A0J9YXS1 232 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 K7ERI5 159 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 PTGESO14684 152 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 LINC01565O15544 149 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 POMCP01189 267 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 MAPTP10636 758 aaKnown RBP9.49□□□□□ -0.89
ATG4D-202ENST00000585437 SCP2P22307 547 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 GTF2F1P35269 517 aaKnown RBP eCLIP9.49□□□□□ -0.89
ATG4D-202ENST00000585437 ALDH7A1P49419 539 aaKnown RBP9.49□□□□□ -0.89
ATG4D-202ENST00000585437 SCNN1GP51170 649 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 ZNF445P59923 1031 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 KRT85P78386 507 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 CEBPZQ03701 1054 aaKnown RBP9.49□□□□□ -0.89
ATG4D-202ENST00000585437 DLX2Q07687 328 aaPredicted RBP9.49□□□□□ -0.89
ATG4D-202ENST00000585437 RAD51AP2Q09MP3 1159 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 GRIK3Q13003 919 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 ADAM15Q13444 863 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 MCM6Q14566 821 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 DUSP6Q16828 381 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 DCAF4L1Q3SXM0 396 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 SPECC1Q5M775 1068 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 ATF7IP2Q5U623 682 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 CAVIN1Q6NZI2 390 aaKnown RBP9.49□□□□□ -0.89
ATG4D-202ENST00000585437 DDX53Q86TM3 631 aaKnown RBP9.49□□□□□ -0.89
ATG4D-202ENST00000585437 GPBP1Q86WP2 473 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 EFHBQ8N7U6 833 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 KRI1Q8N9T8 703 aaKnown RBP9.49□□□□□ -0.89
ATG4D-202ENST00000585437 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.49□□□□□ -0.89
ATG4D-202ENST00000585437 PPP2R3CQ969Q6 453 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 TMEM169Q96HH4 297 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 MSLNLQ96KJ4 702 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 GAD1Q99259 594 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 ACO2Q99798 780 aaKnown RBP9.49□□□□□ -0.89
ATG4D-202ENST00000585437 ADPGKQ9BRR6 497 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 CDT1Q9H211 546 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 MARCH5Q9NX47 278 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 MIOSQ9NXC5 875 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 LARSQ9P2J5 1176 aaKnown RBP9.49□□□□□ -0.89
ATG4D-202ENST00000585437 KCNG1Q9UIX4 513 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 USP20Q9Y2K6 914 aa9.49□□□□□ -0.89
ATG4D-202ENST00000585437 CCDC169A6NNP5 214 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 SFI1A8K8P3 1242 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 NT5C1B-RDH14C9J2C7 533 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 NRP1O14786 923 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 SPTLC2O15270 562 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 SLC16A4O15374 487 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 RECQL4O94761 1208 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 SSBP05455 408 aaKnown RBP eCLIP9.48□□□□□ -0.89
ATG4D-202ENST00000585437 KCNA5P22460 613 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 AKAP5P24588 427 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 UBE2HP62256 183 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 CACNB1Q02641 598 aaPredicted RBP9.48□□□□□ -0.89
ATG4D-202ENST00000585437 KRT17Q04695 432 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 RNASELQ05823 741 aaKnown RBP9.48□□□□□ -0.89
ATG4D-202ENST00000585437 GIT2Q14161 759 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 AXDND1Q5T1B0 1012 aaPredicted RBP9.48□□□□□ -0.89
ATG4D-202ENST00000585437 ATL3Q6DD88 541 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 ZPBP2Q6X784 338 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 TMEM184AQ6ZMB5 413 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms