RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 MINDY3Q9H8M7 445 aa14.11□□□□□ -0.15
TRIM47-202ENST00000585333 UBN1Q9NPG3 1134 aa14.11□□□□□ -0.15
TRIM47-202ENST00000585333 TOPORSQ9NS56 1045 aaPredicted RBP14.11□□□□□ -0.15
TRIM47-202ENST00000585333 HSPBP1Q9NZL4 362 aa14.11□□□□□ -0.15
TRIM47-202ENST00000585333 ST3GAL5Q9UNP4 418 aa14.11□□□□□ -0.15
TRIM47-202ENST00000585333 NOC2LQ9Y3T9 749 aaKnown RBP14.11□□□□□ -0.15
TRIM47-202ENST00000585333 CLTAP09496 248 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 ACTN1P12814 892 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 HOXD13P35453 343 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 YARSP54577 528 aaKnown RBP14.1□□□□□ -0.15
TRIM47-202ENST00000585333 MARSP56192 900 aaKnown RBP14.1□□□□□ -0.15
TRIM47-202ENST00000585333 KCNA1Q09470 495 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 LPIN1Q14693 890 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 IQCB1Q15051 598 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 CEP135Q66GS9 1140 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 FAM186BQ8IYM0 893 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 WNT8BQ93098 351 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 PGBD4Q96DM1 585 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 ZNF668Q96K58 619 aaPredicted RBP14.1□□□□□ -0.15
TRIM47-202ENST00000585333 ERVK-5Q9HDB9 667 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 PRDM5Q9NQX1 630 aaPredicted RBP14.1□□□□□ -0.15
TRIM47-202ENST00000585333 DMAC2Q9NW81 257 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 ARMCX3Q9UH62 379 aaPredicted RBP14.1□□□□□ -0.15
TRIM47-202ENST00000585333 PADI3Q9ULW8 664 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 NR2E3Q9Y5X4 410 aa14.1□□□□□ -0.15
TRIM47-202ENST00000585333 TRIM49BA6NDI0 452 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 CBFA2T2O43439 604 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 EVI5O60447 810 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 IL18RAPO95256 599 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 CXCL10P02778 98 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 CYP2J2P51589 502 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 AP3M2P53677 418 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 CETN1Q12798 172 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 PPIGQ13427 754 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRIM47-202ENST00000585333 MFSD5Q6N075 450 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 LRRC55Q6ZSA7 311 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 NT5DC4Q86YG4 428 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 DHX40Q8IX18 779 aaKnown RBP14.09□□□□□ -0.15
TRIM47-202ENST00000585333 TMEM40Q8WWA1 233 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 FBXL18Q96ME1 805 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 DUSP9Q99956 384 aaKnown RBP14.09□□□□□ -0.15
TRIM47-202ENST00000585333 PDZD7Q9H5P4 517 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 PLEKHA5Q9HAU0 1116 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 CDHR5Q9HBB8 845 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 PTPRHQ9HD43 1115 aa14.09□□□□□ -0.15
TRIM47-202ENST00000585333 KCNJ18B7U540 433 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 CLIC2O15247 247 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 B4GALT5O43286 388 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 HOXA2O43364 376 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 XPOTO43592 962 aaKnown RBP14.08□□□□□ -0.16
TRIM47-202ENST00000585333 N4BP1O75113 896 aaKnown RBP14.08□□□□□ -0.16
TRIM47-202ENST00000585333 HOXA11P31270 313 aaPredicted RBP14.08□□□□□ -0.16
TRIM47-202ENST00000585333 CD52P31358 61 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 GRM5P41594 1212 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 MTIF2P46199 727 aaKnown RBP14.08□□□□□ -0.16
TRIM47-202ENST00000585333 KCNJ12Q14500 433 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 GSE1Q14687 1217 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 SNRNP35Q16560 246 aaKnown RBP14.08□□□□□ -0.16
TRIM47-202ENST00000585333 PLEKHG4Q58EX7 1191 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 CDKAL1Q5VV42 579 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 CNKSR3Q6P9H4 555 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 TRAF7Q6Q0C0 670 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 LUZP1Q86V48 1076 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 TMC2Q8TDI7 906 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 CNOT6LQ96LI5 555 aaKnown RBP14.08□□□□□ -0.16
TRIM47-202ENST00000585333 FNBP1Q96RU3 617 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 CBWD1Q9BRT8 395 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 PPP1R12CQ9BZL4 782 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 CDT1Q9H211 546 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 MTIF3Q9H2K0 278 aaKnown RBP14.08□□□□□ -0.16
TRIM47-202ENST00000585333 RPF1Q9H9Y2 349 aaKnown RBP14.08□□□□□ -0.16
TRIM47-202ENST00000585333 FANCLQ9NW38 375 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 TANC1Q9C0D5 1861 aa14.08□□□□□ -0.16
TRIM47-202ENST00000585333 BRCA2P51587 3418 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 ANKRD63C9JTQ0 380 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 ZNF623O75123 536 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 BAIAP3O94812 1187 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 EOMESO95936 686 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 SERPINC1P01008 464 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 ADSSP30520 456 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 MRE11P49959 708 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 PMS1P54277 932 aaKnown RBP14.07□□□□□ -0.16
TRIM47-202ENST00000585333 IKBKEQ14164 716 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 NCAPHQ15003 741 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 TCP11X2Q5H9J9 407 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 SLC39A4Q6P5W5 647 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 SLC24A5Q71RS6 500 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 RNF214Q8ND24 703 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 CPB2Q96IY4 423 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 ACAP3Q96P50 834 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 LBHD1Q9BQE6 289 aaPredicted RBP14.07□□□□□ -0.16
TRIM47-202ENST00000585333 FAM213AQ9BRX8 229 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 ASB7Q9H672 318 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 RGS18Q9NS28 235 aa14.07□□□□□ -0.16
TRIM47-202ENST00000585333 RBAKQ9NYW8 714 aaPredicted RBP14.07□□□□□ -0.16
TRIM47-202ENST00000585333 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRIM47-202ENST00000585333 A0A0U1RQF3 1178 aa14.06□□□□□ -0.16
TRIM47-202ENST00000585333 ABHD14A-ACY1A0A1B0GW23 586 aa14.06□□□□□ -0.16
TRIM47-202ENST00000585333 CARNS1A5YM72 827 aa14.06□□□□□ -0.16
TRIM47-202ENST00000585333 CSDE1O75534 798 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms