RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 TRIM42Q8IWZ5 723 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 TMEM87AQ8NBN3 555 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 ARRDC4Q8NCT1 418 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 GIMAP8Q8ND71 665 aaPredicted RBP6.35□□□□□ -1.39
CDH8-213ENST00000584966 PAWRQ96IZ0 340 aaKnown RBP6.35□□□□□ -1.39
CDH8-213ENST00000584966 FAM20AQ96MK3 541 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 SPATA33Q96N06 139 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 FRMD6Q96NE9 622 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 RIT2Q99578 217 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 ZNF577Q9BSK1 485 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 AP5M1Q9H0R1 490 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 UNC45AQ9H3U1 944 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 C7orf69Q9H7B7 122 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 TBC1D22BQ9NU19 505 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 SLC9A2Q9UBY0 812 aa6.35□□□□□ -1.39
CDH8-213ENST00000584966 A0A1W2PQ45 241 aaPredicted RBP6.34□□□□□ -1.39
CDH8-213ENST00000584966 A0A1W2PQY0 241 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 F13A1P00488 732 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 LGALS2P05162 132 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 ATP2B1P20020 1258 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 MCM7P33993 719 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 IDH3AP50213 366 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 CPT1AP50416 773 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 ACTR2P61160 394 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 ATP2C1P98194 919 aaPredicted RBP6.34□□□□□ -1.39
CDH8-213ENST00000584966 PPP2R5CQ13362 524 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 ORC2Q13416 577 aaPredicted RBP6.34□□□□□ -1.39
CDH8-213ENST00000584966 SNX17Q15036 470 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 SETDB1Q15047 1291 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 DGKDQ16760 1214 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 RILPL1Q5EBL4 403 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 RNF43Q68DV7 783 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 ZNF746Q6NUN9 644 aaPredicted RBP6.34□□□□□ -1.39
CDH8-213ENST00000584966 XKR5Q6UX68 686 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 CXCL17Q6UXB2 119 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 SLC39A5Q6ZMH5 540 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.34□□□□□ -1.39
CDH8-213ENST00000584966 BRAPQ7Z569 592 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 IL22RA1Q8N6P7 574 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 POU5F2Q8N7G0 328 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 PCSK9Q8NBP7 692 aaKnown RBP6.34□□□□□ -1.39
CDH8-213ENST00000584966 PPP1R13LQ8WUF5 828 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 SEPT1Q8WYJ6 367 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 PIK3R5Q8WYR1 880 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 FERMT2Q96AC1 680 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 CHAMP1Q96JM3 812 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 CTAGE1Q96RT6 745 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 NAP1L4Q99733 375 aaKnown RBP6.34□□□□□ -1.39
CDH8-213ENST00000584966 FTOQ9C0B1 505 aaKnown RBP eCLIP6.34□□□□□ -1.39
CDH8-213ENST00000584966 ZSCAN16Q9H4T2 348 aaPredicted RBP6.34□□□□□ -1.39
CDH8-213ENST00000584966 MLXIPQ9HAP2 919 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 CLIC4Q9Y696 253 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 PTPRSQ13332 1948 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 TANC1Q9C0D5 1861 aa6.34□□□□□ -1.39
CDH8-213ENST00000584966 ELP1O95163 1332 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 EMSYQ7Z589 1322 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 LAMA3Q16787 3333 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 DDX39AO00148 427 aaKnown RBP6.33□□□□□ -1.4
CDH8-213ENST00000584966 ZNF862O60290 1169 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 NEMFO60524 1076 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 KPNA6O60684 536 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 SLITRK3O94933 977 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 F2P00734 622 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 HSP90AA1P07900 732 aaKnown RBP6.33□□□□□ -1.4
CDH8-213ENST00000584966 MYL3P08590 195 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 SUPT20HL2P0C7V6 817 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 ZNF286BP0CG31 522 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 RARAP10276 462 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 HOXC8P31273 242 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 TCF7P36402 384 aaPredicted RBP6.33□□□□□ -1.4
CDH8-213ENST00000584966 PSMC6P62333 389 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 ADAM17P78536 824 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 GRIN1Q05586 938 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 SF3A1Q15459 793 aaKnown RBP6.33□□□□□ -1.4
CDH8-213ENST00000584966 CALCRLQ16602 461 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 UGCGQ16739 394 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 LRRC26Q2I0M4 334 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 LRCH2Q5VUJ6 765 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 PLPPR4Q7Z2D5 763 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 NECAB2Q7Z6G3 386 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 SESTD1Q86VW0 696 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 CCDC60Q8IWA6 550 aaPredicted RBP6.33□□□□□ -1.4
CDH8-213ENST00000584966 SLFN12Q8IYM2 578 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 IGSF22Q8N9C0 903 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 AFAP1L1Q8TED9 768 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 UTP4Q969X6 686 aaKnown RBP6.33□□□□□ -1.4
CDH8-213ENST00000584966 DRC1Q96MC2 740 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 USP28Q96RU2 1077 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 CEP89Q96ST8 783 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 HSD17B14Q9BPX1 270 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 SDF4Q9BRK5 362 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 MTG1Q9BT17 334 aaPredicted RBP6.33□□□□□ -1.4
CDH8-213ENST00000584966 TEKT3Q9BXF9 490 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 SENP6Q9GZR1 1112 aaPredicted RBP6.33□□□□□ -1.4
CDH8-213ENST00000584966 RNPEPQ9H4A4 650 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 C11orf49Q9H6J7 331 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 TTC12Q9H892 705 aaPredicted RBP6.33□□□□□ -1.4
CDH8-213ENST00000584966 SPC25Q9HBM1 224 aa6.33□□□□□ -1.4
CDH8-213ENST00000584966 WRAP73Q9P2S5 460 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms