RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 CNTNAP2Q9UHC6 1331 aa15.22■□□□□ 0.03
UBBP4-202ENST00000584755 PCNTO95613 3336 aa15.22■□□□□ 0.03
UBBP4-202ENST00000584755 CLDN3O15551 220 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 TREHO43280 583 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 INHAP05111 366 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 HSPA6P17066 643 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 GTF2H1P32780 548 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 NLRP11P59045 1033 aaKnown RBP15.21■□□□□ 0.03
UBBP4-202ENST00000584755 PPP3CAQ08209 521 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 PRPF4BQ13523 1007 aaKnown RBP15.21■□□□□ 0.03
UBBP4-202ENST00000584755 PSMD6Q15008 389 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 ATF7IP2Q5U623 682 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 MPZL3Q6UWV2 235 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 USP37Q86T82 979 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 C7orf31Q8N865 590 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 PCSK9Q8NBP7 692 aaKnown RBP15.21■□□□□ 0.03
UBBP4-202ENST00000584755 ZNF397Q8NF99 534 aaPredicted RBP15.21■□□□□ 0.03
UBBP4-202ENST00000584755 ZNF668Q96K58 619 aaPredicted RBP15.21■□□□□ 0.03
UBBP4-202ENST00000584755 FAM213AQ9BRX8 229 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 SIX2Q9NPC8 291 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 GCNT4Q9P109 453 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 GTF2IRD1Q9UHL9 959 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 HTTP42858 3142 aa15.21■□□□□ 0.03
UBBP4-202ENST00000584755 LRRIQ3A6PVS8 624 aaPredicted RBP15.2■□□□□ 0.02
UBBP4-202ENST00000584755 ASGR1P07306 291 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 SLC9A1P19634 815 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 GRK4P32298 578 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 CDK17Q00537 523 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 PCBP1Q15365 356 aaKnown RBP eCLIP15.2■□□□□ 0.02
UBBP4-202ENST00000584755 KCNA10Q16322 511 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 NBPF20Q3BBV1 942 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 WDR59Q6PJI9 974 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 NME8Q8N427 588 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 LMO3Q8TAP4 145 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 PPP1R13LQ8WUF5 828 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 NLRP7Q8WX94 980 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 ANKFY1Q9P2R3 1169 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 PLAGL2Q9UPG8 496 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 COQ4Q9Y3A0 265 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 DAAM1Q9Y4D1 1078 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 OGTO15294 1046 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 B4GALT5O43286 388 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 CHMP4BP1P59074 171 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 ZNF200P98182 395 aaPredicted RBP15.2■□□□□ 0.02
UBBP4-202ENST00000584755 MYL7Q01449 175 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 NOLC1Q14978 699 aaKnown RBP eCLIP15.2■□□□□ 0.02
UBBP4-202ENST00000584755 EPC2Q52LR7 807 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 KLHDC7AQ5VTJ3 777 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 LHX8Q68G74 356 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 TAF2Q6P1X5 1199 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 TRIM65Q6PJ69 517 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 TMTC1Q8IUR5 882 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 GCOM2Q9BZD3 368 aaPredicted RBP15.2■□□□□ 0.02
UBBP4-202ENST00000584755 TMEM117Q9H0C3 514 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 FAM49AQ9H0Q0 323 aaPredicted RBP15.2■□□□□ 0.02
UBBP4-202ENST00000584755 NUCKS1Q9H1E3 243 aaKnown RBP15.2■□□□□ 0.02
UBBP4-202ENST00000584755 TMEM8AQ9HCN3 771 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 HMX1Q9NP08 348 aaPredicted RBP15.2■□□□□ 0.02
UBBP4-202ENST00000584755 SPTLC3Q9NUV7 552 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 WBP1LQ9NX94 342 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 PTCH2Q9Y6C5 1203 aa15.2■□□□□ 0.02
UBBP4-202ENST00000584755 TRIP12Q14669 1992 aaPredicted RBP15.2■□□□□ 0.02
UBBP4-202ENST00000584755 FRMPD3Q5JV73 1810 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 CABYRO75952 493 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 UCHL3P15374 230 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 GCLMP48507 274 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 ACOT2P49753 483 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 POU5F1Q01860 360 aaKnown RBP15.19■□□□□ 0.02
UBBP4-202ENST00000584755 KIZQ2M2Z5 673 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 ZBTB41Q5SVQ8 909 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 EEF1DP3Q658K8 133 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 PDXDC1Q6P996 788 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 CYP26C1Q6V0L0 522 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 C15orf39Q6ZRI6 1047 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 RNF180Q86T96 592 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 RPAINQ86UA6 219 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 BRSK2Q8IWQ3 736 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 EHBP1Q8NDI1 1231 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 DNAJB3Q8WWF6 145 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 SYN2Q92777 582 aaPredicted RBP15.19■□□□□ 0.02
UBBP4-202ENST00000584755 TSEN34Q9BSV6 310 aaKnown RBP15.19■□□□□ 0.02
UBBP4-202ENST00000584755 BEGAINQ9BUH8 593 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 CDT1Q9H211 546 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 CPSF3Q9UKF6 684 aaKnown RBP15.19■□□□□ 0.02
UBBP4-202ENST00000584755 MYO6Q9UM54 1294 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 TRIM17Q9Y577 477 aa15.19■□□□□ 0.02
UBBP4-202ENST00000584755 GRIN2DO15399 1336 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 TSPAN1O60635 241 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 RPLP2P05387 115 aaKnown RBP15.18■□□□□ 0.02
UBBP4-202ENST00000584755 MCF2P10911 925 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 ACTN1P12814 892 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 DARSP14868 501 aaKnown RBP15.18■□□□□ 0.02
UBBP4-202ENST00000584755 ARF4P18085 180 aaPredicted RBP15.18■□□□□ 0.02
UBBP4-202ENST00000584755 MATR3P43243 847 aaKnown RBP eCLIP15.18■□□□□ 0.02
UBBP4-202ENST00000584755 MXI1P50539 228 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 POLR2FP61218 127 aaKnown RBP15.18■□□□□ 0.02
UBBP4-202ENST00000584755 APBA1Q02410 837 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 CETN1Q12798 172 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 ZNF568Q3ZCX4 644 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 E4F1Q66K89 784 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms