RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PTPRHQ9HD43 1115 aa20■□□□□ 0.79
RFFL-211ENST00000584541 AGO2Q9UKV8 859 aaKnown RBP20■□□□□ 0.79
RFFL-211ENST00000584541 TET1Q8NFU7 2136 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 MICAL3Q7RTP6 2002 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 A0A0B4J269 797 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 BECN2A8MW95 431 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 CETN3O15182 167 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 NPTXRO95502 500 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 SKIP12755 728 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 SYN1P17600 705 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 RAB27AP51159 221 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 MYL5Q02045 173 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 FPGSQ05932 587 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 ADAM9Q13443 819 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 SPATA1Q5VX52 437 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 SLC9A9Q8IVB4 645 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 HACE1Q8IYU2 909 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 XXYLT1Q8NBI6 393 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 NOC3LQ8WTT2 800 aaKnown RBP19.99■□□□□ 0.79
RFFL-211ENST00000584541 BADQ92934 168 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 ADAM2Q99965 735 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 CBWD1Q9BRT8 395 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 CDT1Q9H211 546 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 TMX1Q9H3N1 280 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 KIAA1586Q9HCI6 787 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 HSPBP1Q9NZL4 362 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 ZMYND8Q9ULU4 1186 aaPredicted RBP19.99■□□□□ 0.79
RFFL-211ENST00000584541 FRMD4BQ9Y2L6 1034 aa19.99■□□□□ 0.79
RFFL-211ENST00000584541 ABLIM1O14639 778 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 OGTO15294 1046 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 EXOC3O60645 756 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 ACTN1P12814 892 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 ADSSP30520 456 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 IKBKEQ14164 716 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 DSC3Q14574 896 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 GPD1LQ8N335 351 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 AOPEPQ8N6M6 819 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 FAM200AQ8TCP9 573 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 TMEM174Q8WUU8 243 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 CEP63Q96MT8 703 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 DUSP9Q99956 384 aaKnown RBP19.98■□□□□ 0.79
RFFL-211ENST00000584541 IL23AQ9NPF7 189 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 C1orf112Q9NSG2 853 aa19.98■□□□□ 0.79
RFFL-211ENST00000584541 CITO14578 2027 aa19.97■□□□□ 0.79
RFFL-211ENST00000584541 IKBKBO14920 756 aa19.97■□□□□ 0.79
RFFL-211ENST00000584541 TPM4P67936 248 aa19.97■□□□□ 0.79
RFFL-211ENST00000584541 CEP135Q66GS9 1140 aa19.97■□□□□ 0.79
RFFL-211ENST00000584541 CCDC94Q9BW85 323 aaPredicted RBP19.97■□□□□ 0.79
RFFL-211ENST00000584541 TRAIPQ9BWF2 469 aa19.97■□□□□ 0.79
RFFL-211ENST00000584541 SRRTQ9BXP5 876 aaKnown RBP19.97■□□□□ 0.79
RFFL-211ENST00000584541 EIF2AQ9BY44 585 aaKnown RBP19.97■□□□□ 0.79
RFFL-211ENST00000584541 RGS18Q9NS28 235 aa19.97■□□□□ 0.79
RFFL-211ENST00000584541 FAM105AQ9NUU6 356 aa19.97■□□□□ 0.79
RFFL-211ENST00000584541 DMAC2Q9NW81 257 aa19.97■□□□□ 0.79
RFFL-211ENST00000584541 RNF216Q9NWF9 866 aaPredicted RBP19.97■□□□□ 0.79
RFFL-211ENST00000584541 EXTL3O43909 919 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 MGEA5O60502 916 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 EFCAB14O75071 495 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 UBXN11Q5T124 520 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 SLC24A5Q71RS6 500 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 FAM114A1Q8IWE2 563 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 ZC3H3Q8IXZ2 948 aaKnown RBP19.96■□□□□ 0.79
RFFL-211ENST00000584541 THNSL1Q8IYQ7 743 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 SAAL1Q96ER3 474 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 MED15Q96RN5 788 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 FAM213AQ9BRX8 229 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 HAPLN2Q9GZV7 340 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 TSPYL2Q9H2G4 693 aaPredicted RBP19.96■□□□□ 0.79
RFFL-211ENST00000584541 CBX8Q9HC52 389 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 NFE2L3Q9Y4A8 694 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 PCDHB2Q9Y5E7 798 aa19.96■□□□□ 0.79
RFFL-211ENST00000584541 ABHD14A-ACY1A0A1B0GW23 586 aa19.95■□□□□ 0.78
RFFL-211ENST00000584541 GOLGA8IPA6NC78 632 aa19.95■□□□□ 0.78
RFFL-211ENST00000584541 GOLGA8JA6NMD2 632 aa19.95■□□□□ 0.78
RFFL-211ENST00000584541 GOLGA6L19H0YKK7 550 aa19.95■□□□□ 0.78
RFFL-211ENST00000584541 GNA14O95837 355 aa19.95■□□□□ 0.78
RFFL-211ENST00000584541 EPB41P11171 864 aaKnown RBP19.95■□□□□ 0.78
RFFL-211ENST00000584541 PSMC2P35998 433 aaKnown RBP19.95■□□□□ 0.78
RFFL-211ENST00000584541 GRM5P41594 1212 aa19.95■□□□□ 0.78
RFFL-211ENST00000584541 FILIP1Q7Z7B0 1213 aa19.95■□□□□ 0.78
RFFL-211ENST00000584541 PGBD4Q96DM1 585 aa19.95■□□□□ 0.78
RFFL-211ENST00000584541 MKNK1Q9BUB5 465 aa19.95■□□□□ 0.78
RFFL-211ENST00000584541 THAP9Q9H5L6 903 aa19.95■□□□□ 0.78
RFFL-211ENST00000584541 MAGEC2Q9UBF1 373 aaPredicted RBP19.95■□□□□ 0.78
RFFL-211ENST00000584541 IPPQ9Y573 584 aa19.95■□□□□ 0.78
RFFL-211ENST00000584541 RALGAPA2Q2PPJ7 1873 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 A0A0U1RQF3 1178 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 ZNF233A6NK53 670 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 ENPP3O14638 875 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 SLC16A3O15427 465 aaKnown RBP19.94■□□□□ 0.78
RFFL-211ENST00000584541 CLTAP09496 248 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 ACRP10323 421 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 ACOT2P49753 483 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 YARSP54577 528 aaKnown RBP19.94■□□□□ 0.78
RFFL-211ENST00000584541 OSTNP61366 133 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 IQCB1Q15051 598 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 SNRNP35Q16560 246 aaKnown RBP19.94■□□□□ 0.78
RFFL-211ENST00000584541 CCDC40Q4G0X9 1142 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 PSRC1Q6PGN9 363 aaPredicted RBP19.94■□□□□ 0.78
RFFL-211ENST00000584541 LRRC55Q6ZSA7 311 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms