RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 SCN5AQ14524 2016 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 TANC1Q9C0D5 1861 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 ZMYM2Q9UBW7 1377 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 ENPP3O14638 875 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 CLIC2O15247 247 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 TGFB1I1O43294 461 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 CALUO43852 315 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-216ENST00000583804 PIGRP01833 764 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 MAGEA10P43363 369 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-216ENST00000583804 NCAPHQ15003 741 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 COBLL1Q53SF7 1204 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 ANKRD40Q6AI12 368 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 SLFN12LQ6IEE8 588 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 ARMCX5Q6P1M9 558 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 SLC27A1Q6PCB7 646 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 PSRC1Q6PGN9 363 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-216ENST00000583804 MPZL3Q6UWV2 235 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 RTN4RL1Q86UN2 441 aaPredicted RBP11.96□□□□□ -0.49
TOP3A-216ENST00000583804 RNF169Q8NCN4 708 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 GOLGA5Q8TBA6 731 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 TSG101Q99816 390 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 MSTO1Q9BUK6 570 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 EIF2AQ9BY44 585 aaKnown RBP11.96□□□□□ -0.49
TOP3A-216ENST00000583804 KCTD10Q9H3F6 313 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 PCIF1Q9H4Z3 704 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 AGPAT3Q9NRZ7 376 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 RGS18Q9NS28 235 aa11.96□□□□□ -0.49
TOP3A-216ENST00000583804 SAMSN1Q9NSI8 373 aaKnown RBP11.96□□□□□ -0.49
TOP3A-216ENST00000583804 TYW1Q9NV66 732 aaKnown RBP11.96□□□□□ -0.49
TOP3A-216ENST00000583804 ABHD14A-ACY1A0A1B0GW23 586 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 ZBBXA8MT70 800 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 PDXKO00764 312 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 ATP1A3P13637 1013 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 CLCN1P35523 988 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 CYP2J2P51589 502 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 PTPN21Q16825 1174 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 TMEM240Q5SV17 173 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 UBXN11Q5T124 520 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 SLC24A5Q71RS6 500 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 THNSL1Q8IYQ7 743 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 LINC01599Q8WXQ3 324 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 ANP32BQ92688 251 aaKnown RBP11.95□□□□□ -0.5
TOP3A-216ENST00000583804 DUSP9Q99956 384 aaKnown RBP11.95□□□□□ -0.5
TOP3A-216ENST00000583804 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.95□□□□□ -0.53e-10■■■□□ 15.7
TOP3A-216ENST00000583804 CBWD1Q9BRT8 395 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 CDT1Q9H211 546 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-216ENST00000583804 PTPRHQ9HD43 1115 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 RRAGDQ9NQL2 400 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-216ENST00000583804 C1orf112Q9NSG2 853 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 FAM105AQ9NUU6 356 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 RWDD2AQ9UIY3 292 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 PCDHB2Q9Y5E7 798 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 A0A0B4J269 797 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 SMTNL1A8MU46 457 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 AP5Z1O43299 807 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 EFCAB14O75071 495 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 MCF2P10911 925 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 SKIP12755 728 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 GARTP22102 1010 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 PROZP22891 400 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 CCNE1P24864 410 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 ERCC5P28715 1186 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-216ENST00000583804 ADSSP30520 456 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 KCNJ6P48051 423 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 OSTNP61366 133 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 SNRPFP62306 86 aaKnown RBP11.95□□□□□ -0.5
TOP3A-216ENST00000583804 MCL1Q07820 350 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 NOLC1Q14978 699 aaKnown RBP eCLIP11.95□□□□□ -0.5
TOP3A-216ENST00000583804 DCAF4L1Q3SXM0 396 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 SEZ6Q53EL9 994 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 SPATA1Q5VX52 437 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 CENPPQ6IPU0 288 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 TTI2Q6NXR4 508 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.95□□□□□ -0.5
TOP3A-216ENST00000583804 FAM43BQ6ZT52 329 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-216ENST00000583804 SAAL1Q96ER3 474 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 BPIFA3Q9BQP9 254 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 APOL6Q9BWW8 343 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 HAPLN2Q9GZV7 340 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 CGNQ9P2M7 1197 aaKnown RBP11.95□□□□□ -0.5
TOP3A-216ENST00000583804 AGO2Q9UKV8 859 aaKnown RBP11.95□□□□□ -0.5
TOP3A-216ENST00000583804 HES2Q9Y543 173 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 STYXL1Q9Y6J8 313 aa11.95□□□□□ -0.5
TOP3A-216ENST00000583804 TET1Q8NFU7 2136 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 A0A0U1RQF3 1178 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-216ENST00000583804 BICDL2A1A5D9 508 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 GOLGA8IPA6NC78 632 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 GOLGA8JA6NMD2 632 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 C9IYK1 514 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 ABLIM1O14639 778 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 BAIAP3O94812 1187 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 AMHP03971 560 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 NR3C1P04150 777 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 ACOT2P49753 483 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 RAB27AP51159 221 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 TPM4P67936 248 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 HS1BP3Q53T59 392 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 ECHDC2Q86YB7 292 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms