RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 HK1P19367 917 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 AGXTP21549 392 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 MCAMP43121 646 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 GUCY2FP51841 1108 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 SLC5A3P53794 718 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 PTTG1IPP53801 180 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 SLC25A3Q00325 362 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 PTH1RQ03431 593 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 MALLQ13021 153 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 MTMR1Q13613 665 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 MST1LQ2TV78 715 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 LSM12Q3MHD2 195 aaKnown RBP4.93□□□□□ -1.62
VAPA-206ENST00000583475 DCAF17Q5H9S7 520 aaPredicted RBP4.93□□□□□ -1.62
VAPA-206ENST00000583475 MFSD14BQ5SR56 506 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 ANKS6Q68DC2 871 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 ZNF480Q8WV37 535 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 HOXB13Q92826 284 aaPredicted RBP4.93□□□□□ -1.62
VAPA-206ENST00000583475 PGBD4Q96DM1 585 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 ZNF341Q9BYN7 854 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 CCDC8Q9H0W5 538 aaPredicted RBP4.93□□□□□ -1.62
VAPA-206ENST00000583475 TMPRSS5Q9H3S3 457 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 BCO1Q9HAY6 547 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 DMRT3Q9NQL9 472 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 RBM12Q9NTZ6 932 aaKnown RBP4.93□□□□□ -1.62
VAPA-206ENST00000583475 PARPBPQ9NWS1 579 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 PCDHGA2Q9Y5H1 932 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 GPR45Q9Y5Y3 372 aa4.93□□□□□ -1.62
VAPA-206ENST00000583475 TBKBP1A7MCY6 615 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 NARSO43776 548 aaKnown RBP4.92□□□□□ -1.62
VAPA-206ENST00000583475 ACVRL1P37023 503 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 VPS72Q15906 364 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 FAM47AQ5JRC9 791 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 PRAMEF14Q5SWL7 426 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 SYDE2Q5VT97 1194 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 FNDC7Q5VTL7 733 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 MBNL2Q5VZF2 373 aaKnown RBP4.92□□□□□ -1.62
VAPA-206ENST00000583475 PGM2L1Q6PCE3 622 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 C1orf162Q8NEQ5 155 aaPredicted RBP4.92□□□□□ -1.62
VAPA-206ENST00000583475 REPS2Q8NFH8 660 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 OR7D4Q8NG98 312 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 CEP95Q96GE4 821 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 FAXDC2Q96IV6 333 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 CSRNP2Q9H175 543 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 KCNH6Q9H252 994 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 PCDH12Q9NPG4 1184 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 TRHDEQ9UKU6 1024 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 HDAC5Q9UQL6 1122 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 COL4A3BPQ9Y5P4 624 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 WASHC2CQ9Y4E1 1318 aa4.92□□□□□ -1.62
VAPA-206ENST00000583475 ATRNL1Q5VV63 1379 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 GABRDO14764 452 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 PCDHGA12O60330 932 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 FZD7O75084 574 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 KATNA1O75449 491 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 FSHBP01225 129 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 HSP90B1P14625 803 aaKnown RBP4.91□□□□□ -1.62
VAPA-206ENST00000583475 IARSP41252 1262 aaKnown RBP4.91□□□□□ -1.62
VAPA-206ENST00000583475 ITKQ08881 620 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 FAM50AQ14320 339 aaKnown RBP4.91□□□□□ -1.62
VAPA-206ENST00000583475 SEPT2Q15019 361 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 NOMO1Q15155 1222 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 RABL3Q5HYI8 236 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 FAM180AQ6UWF9 173 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 PDZD4Q76G19 769 aaPredicted RBP4.91□□□□□ -1.62
VAPA-206ENST00000583475 TRMT2AQ8IZ69 625 aaKnown RBP4.91□□□□□ -1.62
VAPA-206ENST00000583475 SCAND2PQ9GZW5 306 aaPredicted RBP4.91□□□□□ -1.62
VAPA-206ENST00000583475 SIK3Q9Y2K2 1263 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 PCDHGA9Q9Y5G4 932 aaKnown RBP4.91□□□□□ -1.62
VAPA-206ENST00000583475 PCDHGA8Q9Y5G5 932 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 PCDHGA7Q9Y5G6 932 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 PCDHGA6Q9Y5G7 932 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 PCDHGA3Q9Y5H0 932 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 HS3ST3A1Q9Y663 406 aa4.91□□□□□ -1.62
VAPA-206ENST00000583475 ALG1L2C9J202 215 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 AKAP8O43823 692 aaKnown RBP4.9□□□□□ -1.63
VAPA-206ENST00000583475 PEX11BO96011 259 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 RBP3P10745 1247 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 ECHS1P30084 290 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 PTPN7P35236 360 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 SREBF1P36956 1147 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 TUBA3CQ13748 450 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 BMT2Q1RMZ1 405 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 TUBA3EQ6PEY2 450 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 DRICH1Q6PGQ1 229 aaPredicted RBP4.9□□□□□ -1.63
VAPA-206ENST00000583475 ZNF572Q7Z3I7 529 aaPredicted RBP4.9□□□□□ -1.63
VAPA-206ENST00000583475 SYT12Q8IV01 421 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 AMOTL1Q8IY63 956 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 PQLC1Q8N2U9 271 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 PPM1NQ8N819 430 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 SLC16A11Q8NCK7 471 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 OR2I1PQ8NGU4 316 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 SLC35B2Q8TB61 432 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 JADE3Q92613 823 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 NDC1Q9BTX1 674 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 ADI1Q9BV57 179 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 SPON1Q9HCB6 807 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 MKS1Q9NXB0 559 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 CLCA2Q9UQC9 943 aa4.9□□□□□ -1.63
VAPA-206ENST00000583475 PRR5-ARHGAP8B1AHC4 643 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 B5MCH6 92 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms