RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 LRRC55Q6ZSA7 311 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 LRRC8DQ7L1W4 858 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 IRF2BP1Q8IU81 584 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 USP38Q8NB14 1042 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CPB2Q96IY4 423 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 HAPLN2Q9GZV7 340 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 PCIF1Q9H4Z3 704 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 THAP9Q9H5L6 903 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 AGO3Q9H9G7 860 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TMEM39AQ9NV64 488 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TBX21Q9UL17 535 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CNTNAP2Q9UHC6 1331 aa17.87■□□□□ 0.45
CDK5RAP3-228ENST00000583363 A0A0B4J269 797 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 FSD2A1L4K1 749 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 GOLGA6L19H0YKK7 550 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 GPR182O15218 404 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 MCL1Q07820 350 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 GSE1Q14687 1217 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 MBTPS1Q14703 1052 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 UVSSAQ2YD98 709 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 EEF1DP3Q658K8 133 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ARMCX5Q6P1M9 558 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 POMGNT1Q8WZA1 660 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 EEF2KMTQ96G04 330 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TCHPQ9BT92 498 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 HIPK3Q9H422 1215 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 PDZD7Q9H5P4 517 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ERVK-5Q9HDB9 667 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 AGPAT5Q9NUQ2 364 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 HSPBP1Q9NZL4 362 aa17.86■□□□□ 0.45
CDK5RAP3-228ENST00000583363 N4BP3O15049 544 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 KIAA0391O15091 583 aaKnown RBP17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CLDN3O15551 220 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 GHRP10912 638 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ZNF18P17022 549 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ITGB8P26012 769 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CYP2J2P51589 502 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 GPNMBQ14956 572 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TMEM132AQ24JP5 1023 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CDKAL1Q5VV42 579 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 MPZL3Q6UWV2 235 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 XXYLT1Q8NBI6 393 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TTYH1Q9H313 450 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CHST12Q9NRB3 414 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 PADI3Q9ULW8 664 aa17.85■□□□□ 0.45
CDK5RAP3-228ENST00000583363 UMODL1Q5DID0 1318 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 GOLGA6L3A6NEY3 463 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 KIAA0355O15063 1070 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 EXOC3O60645 756 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 AKAP3O75969 853 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 GNA14O95837 355 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CD52P31358 61 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 MATR3P43243 847 aaKnown RBP eCLIP17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CASP4P49662 377 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 TPM4P67936 248 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 SMAD3P84022 425 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 NFX1Q12986 1120 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 NOTUMQ6P988 496 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ZBTB33Q86T24 672 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 CDR2LQ86X02 465 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ZSWIM2Q8NEG5 633 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 FBXL18Q96ME1 805 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 MKNK1Q9BUB5 465 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 MSTO1Q9BUK6 570 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 ANKFY1Q9P2R3 1169 aa17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 AGO2Q9UKV8 859 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP3-228ENST00000583363 RBAK-RBAKDNI3L0D1 243 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 EXTL3O43909 919 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 NBNO60934 754 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 PARNO95453 639 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 LDHAP00338 332 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MCF2P10911 925 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CDK11BP21127 795 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CYP2C18P33260 490 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 PSMC2P35998 433 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 PAK2Q13177 524 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 HSP90AA4PQ58FG1 418 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CEP135Q66GS9 1140 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 FAM114A1Q8IWE2 563 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 GPD1LQ8N335 351 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MAFAQ8NHW3 353 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MYLIPQ8WY64 445 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CCDC51Q96ER9 411 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 BORCS6Q96GS4 357 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 WNT8AQ9H1J5 351 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CDT1Q9H211 546 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 TMX1Q9H3N1 280 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 KIAA1586Q9HCI6 787 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 PIN4Q9Y237 131 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 FRMD4BQ9Y2L6 1034 aa17.83■□□□□ 0.44
CDK5RAP3-228ENST00000583363 GOLGA8IPA6NC78 632 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 LRRC10BA6NIK2 292 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 GOLGA8JA6NMD2 632 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 MAPK13O15264 365 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 OGTO15294 1046 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 SLC16A3O15427 465 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 FAM189A1O60320 539 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 TIMP1P01033 207 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 EPHB4P54760 987 aa17.82■□□□□ 0.44
CDK5RAP3-228ENST00000583363 CCL23P55773 120 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms