RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PPP4R3AQ6IN85 833 aa18■□□□□ 0.47
SREBF1-221ENST00000583080 CYP26C1Q6V0L0 522 aa18■□□□□ 0.47
SREBF1-221ENST00000583080 ERMP1Q7Z2K6 904 aa18■□□□□ 0.47
SREBF1-221ENST00000583080 EXOC8Q8IYI6 725 aa18■□□□□ 0.47
SREBF1-221ENST00000583080 OXER1Q8TDS5 423 aa18■□□□□ 0.47
SREBF1-221ENST00000583080 ASAP3Q8TDY4 903 aa18■□□□□ 0.47
SREBF1-221ENST00000583080 RABGGTAQ92696 567 aa18■□□□□ 0.47
SREBF1-221ENST00000583080 PHF20Q9BVI0 1012 aa18■□□□□ 0.47
SREBF1-221ENST00000583080 CSRNP2Q9H175 543 aa18■□□□□ 0.47
SREBF1-221ENST00000583080 CHST7Q9NS84 486 aa18■□□□□ 0.47
SREBF1-221ENST00000583080 FAM205CA6NFA0 338 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 INO80B-WBP1J3KQ70 363 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 ASAP2O43150 1006 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 B4GALT5O43286 388 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 CCNT1O60563 726 aaKnown RBP17.99■□□□□ 0.47
SREBF1-221ENST00000583080 DCNP07585 359 aaKnown RBP17.99■□□□□ 0.47
SREBF1-221ENST00000583080 GCFC2P16383 781 aaKnown RBP17.99■□□□□ 0.47
SREBF1-221ENST00000583080 HTR4Q13639 388 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 CAPSQ13938 189 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 EARS2Q5JPH6 523 aaKnown RBP17.99■□□□□ 0.47
SREBF1-221ENST00000583080 SPECC1Q5M775 1068 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 FUT10Q6P4F1 479 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 ELMSAN1Q6PJG2 1045 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 PIK3AP1Q6ZUJ8 805 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 CDR2LQ86X02 465 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-221ENST00000583080 FAM177A1Q8N128 213 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-221ENST00000583080 GSTCDQ8NEC7 633 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 CCDC51Q96ER9 411 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 ZNF274Q96GC6 653 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-221ENST00000583080 NT5C3AQ9H0P0 336 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 PIDD1Q9HB75 910 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 ARHGEF3Q9NR81 526 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 DPP7Q9UHL4 492 aa17.99■□□□□ 0.47
SREBF1-221ENST00000583080 MTCL1Q9Y4B5 1905 aaKnown RBP17.99■□□□□ 0.47
SREBF1-221ENST00000583080 DOCK6Q96HP0 2047 aa17.98■□□□□ 0.47
SREBF1-221ENST00000583080 LAMP2P13473 410 aa17.98■□□□□ 0.47
SREBF1-221ENST00000583080 ARF4P18085 180 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-221ENST00000583080 AKAP5P24588 427 aa17.98■□□□□ 0.47
SREBF1-221ENST00000583080 AXLP30530 894 aa17.98■□□□□ 0.47
SREBF1-221ENST00000583080 OTUD6AQ7L8S5 288 aa17.98■□□□□ 0.47
SREBF1-221ENST00000583080 IFNLR1Q8IU57 520 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-221ENST00000583080 KCNG4Q8TDN1 519 aa17.98■□□□□ 0.47
SREBF1-221ENST00000583080 ZSWIM4Q9H7M6 989 aa17.98■□□□□ 0.47
SREBF1-221ENST00000583080 DLGAP2Q9P1A6 1054 aa17.98■□□□□ 0.47
SREBF1-221ENST00000583080 CYP46A1Q9Y6A2 500 aa17.98■□□□□ 0.47
SREBF1-221ENST00000583080 NUMBLQ9Y6R0 609 aa17.98■□□□□ 0.47
SREBF1-221ENST00000583080 ANHXE9PGG2 379 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 TBX3O15119 743 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 REC8O95072 547 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 LMNAP02545 664 aaKnown RBP17.97■□□□□ 0.47
SREBF1-221ENST00000583080 LILRA6Q6PI73 481 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 PRSS55Q6UWB4 352 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-221ENST00000583080 TPH2Q8IWU9 490 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 HDAC7Q8WUI4 952 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 PAAF1Q9BRP4 392 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 COLEC11Q9BWP8 271 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 PRKD2Q9BZL6 878 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 FOXQ1Q9C009 403 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 TRIM6Q9C030 488 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-221ENST00000583080 PLEKHA4Q9H4M7 779 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 ZDHHC7Q9NXF8 308 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 KLK14Q9P0G3 267 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 ADAM28Q9UKQ2 775 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 GIT1Q9Y2X7 761 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 WDR87Q6ZQQ6 2873 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 OTOGLQ3ZCN5 2332 aa17.97■□□□□ 0.47
SREBF1-221ENST00000583080 DMXL1Q9Y485 3027 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 POTEMA6NI47 508 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 MARCH6O60337 910 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 NR1I2O75469 434 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 SLITRK3O94933 977 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 NPTXRO95502 500 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 SCRN1Q12765 414 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 TFDP1Q14186 410 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 MXD4Q14582 209 aaPredicted RBP17.96■□□□□ 0.47
SREBF1-221ENST00000583080 PCBP1Q15365 356 aaKnown RBP eCLIP17.96■□□□□ 0.476e-9■■■■■ 51
SREBF1-221ENST00000583080 USP41Q3LFD5 358 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 RTP2Q5QGT7 225 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 CPLX2Q6PUV4 134 aaKnown RBP17.96■□□□□ 0.47
SREBF1-221ENST00000583080 NXPE3Q969Y0 559 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 RMDN1Q96DB5 314 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 RPP25Q9BUL9 199 aaKnown RBP17.96■□□□□ 0.47
SREBF1-221ENST00000583080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.96■□□□□ 0.47
SREBF1-221ENST00000583080 FNIP2Q9P278 1114 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 MYH15Q9Y2K3 1946 aa17.96■□□□□ 0.47
SREBF1-221ENST00000583080 FANCMQ8IYD8 2048 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 LRRN2O75325 713 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 ZMYND10O75800 440 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 GLULP15104 373 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 GLRA2P23416 452 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 ARL2P36404 184 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 NTHL1P78549 312 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 GRIK3Q13003 919 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 PHLDB3Q6NSJ2 640 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 KIAA2013Q8IYS2 634 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 HASPINQ8TF76 798 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 EIF2AK1Q9BQI3 630 aaKnown RBP17.95■□□□□ 0.46
SREBF1-221ENST00000583080 SLC2A4RGQ9NR83 387 aa17.95■□□□□ 0.46
SREBF1-221ENST00000583080 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.95■□□□□ 0.46
SREBF1-221ENST00000583080 FBXW11Q9UKB1 542 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms