RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 GPR88Q9GZN0 384 aa24.52■■□□□ 1.52
CCDC47-204ENST00000582252 ANKZF1Q9H8Y5 726 aa24.52■■□□□ 1.52
CCDC47-204ENST00000582252 RAB21Q9UL25 225 aa24.52■■□□□ 1.52
CCDC47-204ENST00000582252 NOP56O00567 594 aaKnown RBP24.51■■□□□ 1.51
CCDC47-204ENST00000582252 GAS2O43903 313 aaKnown RBP24.51■■□□□ 1.51
CCDC47-204ENST00000582252 PAFAH1B1P43034 410 aa24.51■■□□□ 1.51
CCDC47-204ENST00000582252 CCDC181Q5TID7 509 aa24.51■■□□□ 1.51
CCDC47-204ENST00000582252 ZNF572Q7Z3I7 529 aaPredicted RBP24.51■■□□□ 1.51
CCDC47-204ENST00000582252 PLEKHO2Q8TD55 490 aa24.51■■□□□ 1.51
CCDC47-204ENST00000582252 PACSIN1Q9BY11 444 aa24.51■■□□□ 1.51
CCDC47-204ENST00000582252 ZNF233A6NK53 670 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 DDX3XO00571 662 aaKnown RBP eCLIP24.5■■□□□ 1.511e-27■■■□□ 18.3
CCDC47-204ENST00000582252 EXTL3O43909 919 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 PALMO75781 387 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 PIGRP01833 764 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 TNFAIP3P21580 790 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 TARBP2Q15633 366 aaKnown RBP24.5■■□□□ 1.51
CCDC47-204ENST00000582252 MORN1Q5T089 497 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 ARMCX2Q7L311 632 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 U2AF1L4Q8WU68 220 aaKnown RBP24.5■■□□□ 1.51
CCDC47-204ENST00000582252 TMEM143Q96AN5 459 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 FAM81BQ96LP2 452 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 PCYT2Q99447 389 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 EPC1Q9H2F5 836 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 COQ4Q9Y3A0 265 aa24.5■■□□□ 1.51
CCDC47-204ENST00000582252 LRRIQ4A6NIV6 560 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 LRRIQ3A6PVS8 624 aaPredicted RBP24.49■■□□□ 1.51
CCDC47-204ENST00000582252 LDHAP00338 332 aaKnown RBP24.49■■□□□ 1.51
CCDC47-204ENST00000582252 TFRCP02786 760 aaKnown RBP24.49■■□□□ 1.51
CCDC47-204ENST00000582252 VEGFBP49765 207 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 MFAP3P55082 362 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 MAP2K5Q13163 448 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 LY6KQ17RY6 165 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 CELF3Q5SZQ8 465 aaKnown RBP24.49■■□□□ 1.51
CCDC47-204ENST00000582252 EEPD1Q7L9B9 569 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 ZSWIM2Q8NEG5 633 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 SLC30A5Q8TAD4 765 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 TCP11Q8WWU5 503 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 SOCS4Q8WXH5 440 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 BBXQ8WY36 941 aaPredicted RBP24.49■■□□□ 1.51
CCDC47-204ENST00000582252 CCDC127Q96BQ5 260 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 ARID3AQ99856 593 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 TMEM134Q9H6X4 195 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 K7ERI5 159 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 PNMA6AP0CW24 399 aaPredicted RBP24.49■■□□□ 1.51
CCDC47-204ENST00000582252 GLRA2P23416 452 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 CC2D1AQ6P1N0 951 aaPredicted RBP24.49■■□□□ 1.51
CCDC47-204ENST00000582252 MAMDC4Q6UXC1 1216 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 TAS1R3Q7RTX0 852 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 PLPPR4Q7Z2D5 763 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 HNRNPLLQ8WVV9 542 aaKnown RBP24.49■■□□□ 1.51
CCDC47-204ENST00000582252 MAML3Q96JK9 1138 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 CEP89Q96ST8 783 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 JPH2Q9BR39 696 aaPredicted RBP24.49■■□□□ 1.51
CCDC47-204ENST00000582252 CFHR5Q9BXR6 569 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 STYXL1Q9Y6J8 313 aa24.49■■□□□ 1.51
CCDC47-204ENST00000582252 TNPO2O14787 897 aaKnown RBP24.48■■□□□ 1.51
CCDC47-204ENST00000582252 MAFO75444 373 aaPredicted RBP24.48■■□□□ 1.51
CCDC47-204ENST00000582252 LGR5O75473 907 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 ZRANB2O95218 330 aaKnown RBP eCLIP24.48■■□□□ 1.51
CCDC47-204ENST00000582252 RHOXF2BP0C7M4 288 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 NOP2P46087 812 aaKnown RBP24.48■■□□□ 1.51
CCDC47-204ENST00000582252 GPC3P51654 580 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 MAP2K1Q02750 393 aaPredicted RBP24.48■■□□□ 1.51
CCDC47-204ENST00000582252 CREG2Q8IUH2 290 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 ARHGEF19Q8IW93 802 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 DHX37Q8IY37 1157 aaKnown RBP24.48■■□□□ 1.51
CCDC47-204ENST00000582252 SYCE1Q8N0S2 351 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 MSL3Q8N5Y2 521 aaKnown RBP24.48■■□□□ 1.51
CCDC47-204ENST00000582252 NOA1Q8NC60 698 aaKnown RBP24.48■■□□□ 1.51
CCDC47-204ENST00000582252 FBXL13Q8NEE6 735 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 LNX1Q8TBB1 728 aaPredicted RBP24.48■■□□□ 1.51
CCDC47-204ENST00000582252 ASAP3Q8TDY4 903 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 GLG1Q92896 1179 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 NT5C1BQ96P26 610 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 GPR20Q99678 358 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 RHOXF2Q9BQY4 288 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 TLR10Q9BXR5 811 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 ZNF446Q9NWS9 450 aa24.48■■□□□ 1.51
CCDC47-204ENST00000582252 PCNTO95613 3336 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 TARSL2A2RTX5 802 aaKnown RBP24.47■■□□□ 1.51
CCDC47-204ENST00000582252 FOXN3O00409 490 aaPredicted RBP24.47■■□□□ 1.51
CCDC47-204ENST00000582252 ZNF185O15231 689 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 HOXC6P09630 235 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 SLC26A2P50443 739 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 MEI1Q5TIA1 1274 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 NFRKBQ6P4R8 1299 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 FBXO16Q8IX29 292 aaPredicted RBP24.47■■□□□ 1.51
CCDC47-204ENST00000582252 SYT11Q9BT88 431 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 VTA1Q9NP79 307 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 ZC3H11AO75152 810 aaKnown RBP eCLIP24.47■■□□□ 1.51
CCDC47-204ENST00000582252 LRRN2O75325 713 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 TTLL4Q14679 1199 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 IER5Q5VY09 327 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 WDR93Q6P2C0 686 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 GLYCTKQ8IVS8 523 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 CTNNBL1Q8WYA6 563 aaPredicted RBP24.47■■□□□ 1.51
CCDC47-204ENST00000582252 TAF4BQ92750 862 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 CALR3Q96L12 384 aaKnown RBP24.47■■□□□ 1.51
CCDC47-204ENST00000582252 AGPAT1Q99943 283 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms