RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 TRIM10Q9UDY6 481 aa15.88■□□□□ 0.13
MKS1-211ENST00000581761 DNAJC12Q9UKB3 198 aa15.88■□□□□ 0.13
MKS1-211ENST00000581761 GUCA1BQ9UMX6 200 aa15.88■□□□□ 0.13
MKS1-211ENST00000581761 PCDHA13Q9Y5I0 950 aa15.88■□□□□ 0.13
MKS1-211ENST00000581761 STYXL1Q9Y6J8 313 aa15.88■□□□□ 0.13
MKS1-211ENST00000581761 ZNF233A6NK53 670 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 LRRIQ3A6PVS8 624 aaPredicted RBP15.87■□□□□ 0.13
MKS1-211ENST00000581761 KRT86O43790 486 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 ABL1P00519 1130 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 ZNF286BP0CG31 522 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 SRGAP2CP0DJJ0 459 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 FERP16591 822 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 GTF2F1P35269 517 aaKnown RBP eCLIP15.87■□□□□ 0.13
MKS1-211ENST00000581761 MAGEA1P43355 309 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 EFNA5P52803 228 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 MCCD1P59942 119 aaPredicted RBP15.87■□□□□ 0.13
MKS1-211ENST00000581761 IGBP1P78318 339 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 TRIM32Q13049 653 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 TFDP1Q14186 410 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 HSP90AA2PQ14568 343 aaPredicted RBP15.87■□□□□ 0.13
MKS1-211ENST00000581761 CCL14Q16627 93 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 EPC2Q52LR7 807 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 TXLNBQ8N3L3 684 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 PXYLP1Q8TE99 480 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 PARD3BQ8TEW8 1205 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 SOCS4Q8WXH5 440 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 TRIB2Q92519 343 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 FAM213AQ9BRX8 229 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 TMEM106CQ9BVX2 250 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 TARS2Q9BW92 718 aaKnown RBP15.87■□□□□ 0.13
MKS1-211ENST00000581761 STK33Q9BYT3 514 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 IFIH1Q9BYX4 1025 aaKnown RBP15.87■□□□□ 0.13
MKS1-211ENST00000581761 TMEM117Q9H0C3 514 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 RNPEPQ9H4A4 650 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 L2HGDHQ9H9P8 463 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 FLRT1Q9NZU1 646 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 APEX2Q9UBZ4 518 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 AGO2Q9UKV8 859 aaKnown RBP15.87■□□□□ 0.13
MKS1-211ENST00000581761 TFR2Q9UP52 801 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 USP20Q9Y2K6 914 aa15.87■□□□□ 0.13
MKS1-211ENST00000581761 RCCD1A6NED2 376 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 PMM2O15305 246 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 C22orf31O95567 290 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 IGHA2P01877 340 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 MMP3P08254 477 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 HOXC6P09630 235 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 INSRRP14616 1297 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 RFX1P22670 979 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 GFPT1Q06210 699 aaPredicted RBP15.86■□□□□ 0.13
MKS1-211ENST00000581761 ENPEPQ07075 957 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 KIF5AQ12840 1032 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 MTFR1Q15390 333 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 CDCA2Q69YH5 1023 aaPredicted RBP15.86■□□□□ 0.13
MKS1-211ENST00000581761 KRT39Q6A163 491 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 EFCAB12Q6NXP0 572 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 IRF2BP2Q7Z5L9 587 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 RHPN2Q8IUC4 686 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 METTL13Q8N6R0 699 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 RNF149Q8NC42 400 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 LMO3Q8TAP4 145 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 ZBTB45Q96K62 511 aaPredicted RBP15.86■□□□□ 0.13
MKS1-211ENST00000581761 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.86■□□□□ 0.13
MKS1-211ENST00000581761 MSTO1Q9BUK6 570 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 MRPL4Q9BYD3 311 aaKnown RBP15.86■□□□□ 0.13
MKS1-211ENST00000581761 TMEM8AQ9HCN3 771 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 TOPORSQ9NS56 1045 aaPredicted RBP15.86■□□□□ 0.13
MKS1-211ENST00000581761 ANKFY1Q9P2R3 1169 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 ZNF215Q9UL58 517 aaPredicted RBP15.86■□□□□ 0.13
MKS1-211ENST00000581761 BZW2Q9Y6E2 419 aaKnown RBP15.86■□□□□ 0.13
MKS1-211ENST00000581761 COL1A2P08123 1366 aa15.86■□□□□ 0.13
MKS1-211ENST00000581761 KIAA0100Q14667 2235 aaKnown RBP15.85■□□□□ 0.13
MKS1-211ENST00000581761 RBAK-RBAKDNI3L0D1 243 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 DYNC1I1O14576 645 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 PPFIA4O75335 1185 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 GFPT2O94808 682 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 SLU7O95391 586 aaKnown RBP15.85■□□□□ 0.13
MKS1-211ENST00000581761 LDHAP00338 332 aaKnown RBP15.85■□□□□ 0.13
MKS1-211ENST00000581761 EDN1P05305 212 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 PRKCBP05771 671 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 GTF2H1P32780 548 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 SOX5P35711 763 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 RGS2P41220 211 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 PRKCIP41743 596 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 CLCN3P51790 818 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 NLRP11P59045 1033 aaKnown RBP15.85■□□□□ 0.13
MKS1-211ENST00000581761 TNFAIP2Q03169 654 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 DRAP1Q14919 205 aaPredicted RBP15.85■□□□□ 0.13
MKS1-211ENST00000581761 SLAIN1Q8ND83 568 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 NAPGQ99747 312 aaPredicted RBP15.85■□□□□ 0.13
MKS1-211ENST00000581761 LACRTQ9GZZ8 138 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 CCDC113Q9H0I3 377 aa15.85■□□□□ 0.13
MKS1-211ENST00000581761 LUC7LQ9NQ29 371 aaKnown RBP15.85■□□□□ 0.13
MKS1-211ENST00000581761 PDE4DIPQ5VU43 2346 aa15.84■□□□□ 0.13
MKS1-211ENST00000581761 CTAGE9A4FU28 777 aa15.84■□□□□ 0.13
MKS1-211ENST00000581761 F8VZ95 297 aa15.84■□□□□ 0.13
MKS1-211ENST00000581761 MAGEB2O15479 319 aa15.84■□□□□ 0.13
MKS1-211ENST00000581761 ASAP2O43150 1006 aa15.84■□□□□ 0.13
MKS1-211ENST00000581761 DLATP10515 647 aaKnown RBP15.84■□□□□ 0.13
MKS1-211ENST00000581761 HARSP12081 509 aaKnown RBP15.84■□□□□ 0.13
MKS1-211ENST00000581761 HOXD8P13378 290 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms