RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 FLT3P36888 993 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 FOXF2Q12947 444 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 UBE3CQ15386 1083 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 UBE2R2Q712K3 238 aaPredicted RBP5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 KIF18BQ86Y91 864 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 ANKS1AQ92625 1134 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 CAVIN3Q969G5 261 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 KANSL2Q9H9L4 492 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 MSRAQ9UJ68 235 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 USP18Q9UMW8 372 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 MAST3O60307 1309 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 SALL3Q9BXA9 1300 aa5.19□□□□□ -1.58
SMCHD1-206ENST00000581631 PRSS38A1L453 326 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 TBKBP1A7MCY6 615 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 ZNF891A8MT65 544 aaPredicted RBP5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 B5MCH6 92 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 NRP2O60462 931 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 LTA4HP09960 611 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 CXCR5P32302 372 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 PHC1P78364 1004 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 APBA1Q02410 837 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 NHLH1Q02575 133 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 MGAT5Q09328 741 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 CFAP100Q494V2 611 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 CHTF18Q8WVB6 975 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 FUBP1Q96AE4 644 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 SPON1Q9HCB6 807 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 EVLQ9UI08 416 aaPredicted RBP5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 MAP3K2Q9Y2U5 619 aa5.18□□□□□ -1.58
SMCHD1-206ENST00000581631 LCHNA4D1U4 455 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 PPP1R12AO14974 1030 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 C1QL1O75973 258 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 RBP3P10745 1247 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 ITGB6P18564 788 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 POU3F2P20265 443 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 ELLP55199 621 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 PABPC4Q13310 644 aaKnown RBP eCLIP5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 BMT2Q1RMZ1 405 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 C19orf54Q5BKX5 351 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 NXPE1Q8N323 547 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 SLC9A6Q92581 669 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 NELL1Q92832 810 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 FERMT2Q96AC1 680 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 CEP95Q96GE4 821 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 MTFR1LQ9H019 292 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 MS4A5Q9H3V2 200 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 PRDM12Q9H4Q4 367 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 PPP2R3BQ9Y5P8 575 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 NUMBLQ9Y6R0 609 aa5.17□□□□□ -1.58
SMCHD1-206ENST00000581631 ST20-MTHFSA0A0A6YYL1 179 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 RBMXL2O75526 392 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 C1RP00736 705 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 ERBB2P04626 1255 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 CFIP05156 583 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 ELANEP08246 267 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 MGAT1P26572 445 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 MPP3Q13368 585 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 SOGA3Q5TF21 947 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 AGAP9Q5VTM2 703 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 ABHD15Q6UXT9 468 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 RNF169Q8NCN4 708 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 MAGEC2Q9UBF1 373 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 PRSS50Q9UI38 385 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 ZKSCAN5Q9Y2L8 839 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 FPGT-TNNI3KV9GXZ4 949 aa5.16□□□□□ -1.58
SMCHD1-206ENST00000581631 MGST3O14880 152 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 ITGA10O75578 1167 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 MATN4O95460 622 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 SPATA31D3P0C874 917 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 MANFP55145 182 aaKnown RBP5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 NRG3P56975 720 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 MEF2AQ02078 507 aaPredicted RBP5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 RESTQ13127 1097 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 TRIM25Q14258 630 aaKnown RBP5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 ERCC6LQ2NKX8 1250 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 MFSD14BQ5SR56 506 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 LMBR1LQ6UX01 489 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 SPATA31D4Q6ZUB0 917 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 GLB1L2Q8IW92 636 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 SRRM1Q8IYB3 904 aaKnown RBP5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 ZNF610Q8N9Z0 462 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 SNX33Q8WV41 574 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 RSAD1Q9HA92 442 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 TMEM260Q9NX78 707 aa5.15□□□□□ -1.59
SMCHD1-206ENST00000581631 IGLV2-14P01704 120 aa5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 CLEC2LP0C7M8 214 aa5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 XPAP23025 273 aaPredicted RBP5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 SIM1P81133 766 aaPredicted RBP5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 PPARAQ07869 468 aa5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 ARMC6Q6NXE6 501 aa5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 EFCAB12Q6NXP0 572 aa5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 GPR149Q86SP6 731 aa5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 CDC5LQ99459 802 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 SEMA4GQ9NTN9 838 aa5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 THG1LQ9NWX6 298 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 TESQ9UGI8 421 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 TLK1Q9UKI8 766 aa5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 CDK11AQ9UQ88 783 aaPredicted RBP5.14□□□□□ -1.59
SMCHD1-206ENST00000581631 USP15Q9Y4E8 981 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms