RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 MATN2O00339 956 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 PRPF3O43395 683 aaKnown RBP6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 MAFO75444 373 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 ZRANB2O95218 330 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 C1SP09871 688 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 XPAP23025 273 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 SESN2P58004 480 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 TCIRG1Q13488 830 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 TUBA3CQ13748 450 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 FAM102BQ5T8I3 360 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 KRT40Q6A162 431 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 TRIM68Q6AZZ1 485 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 TUBA3EQ6PEY2 450 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 KLHDC10Q6PID8 442 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 MAMDC4Q6UXC1 1216 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 Q6ZSN1 163 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 BCL6BQ8N143 479 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 SOX7Q9BT81 388 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 PARPBPQ9NWS1 579 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 DNAI1Q9UI46 699 aa6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 RBM8AQ9Y5S9 174 aaKnown RBP6.14□□□□□ -1.43
SMCHD1-205ENST00000581383 GPR15P49685 360 aa6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 ATP2C1P98194 919 aaPredicted RBP6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 KIF23Q02241 960 aaPredicted RBP6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 RIN1Q13671 783 aa6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 CNGB1Q14028 1251 aaPredicted RBP6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 MLC1Q15049 377 aa6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 CCDC181Q5TID7 509 aa6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 FATE1Q969F0 183 aa6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 GFM2Q969S9 779 aaKnown RBP6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 RPL10LQ96L21 214 aaKnown RBP6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 LRGUKQ96M69 825 aa6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 FDXACB1Q9BRP7 624 aaPredicted RBP6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 POLR3BQ9NW08 1133 aaPredicted RBP6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 NCDNQ9UBB6 729 aa6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 TUBD1Q9UJT1 453 aa6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 RCAN3Q9UKA8 241 aa6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 ZBTB21Q9ULJ3 1066 aa6.13□□□□□ -1.43
SMCHD1-205ENST00000581383 DAPK3O43293 454 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 NRP2O60462 931 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 ATF3P18847 181 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 MAKP20794 623 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 MGAT5Q09328 741 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 ADRM1Q16186 407 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 CCDC178Q5BJE1 867 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 NXNQ6DKJ4 435 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 TCEAL8Q8IYN2 117 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 GPR135Q8IZ08 494 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 ANKRD35Q8N283 1001 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 MIER2Q8N344 545 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 IL17DQ8TAD2 202 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 LPPQ93052 612 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 C8orf48Q96LL4 319 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 WDR92Q96MX6 357 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 HAPLN2Q9GZV7 340 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 C11orf21Q9P2W6 132 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 PNMA8BQ9ULN7 279 aaPredicted RBP6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 VWA7Q9Y334 891 aa6.12□□□□□ -1.43
SMCHD1-205ENST00000581383 HNRNPLP14866 589 aaKnown RBP eCLIP6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 CYP2C19P33261 490 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 NRG3P56975 720 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 CD69Q07108 199 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 MALLQ13021 153 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 ANO4Q32M45 955 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 UAP1L1Q3KQV9 507 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 MUM1L1Q5H9M0 696 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 LMBR1LQ6UX01 489 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 GLB1L2Q8IW92 636 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 MAGEB6Q8N7X4 407 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 TTC8Q8TAM2 541 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 ZNF483Q8TF39 744 aaPredicted RBP6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 CFHR4Q92496 578 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 ARL8AQ96BM9 186 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 SLC7A6OSQ96CW6 309 aaPredicted RBP6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 CLIP3Q96DZ5 547 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 MPHOSPH9Q99550 1183 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 NUP88Q99567 741 aaPredicted RBP6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 MMRN2Q9H8L6 949 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 DMRT3Q9NQL9 472 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 SERPINB13Q9UIV8 391 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 DNM3Q9UQ16 869 aa6.11□□□□□ -1.43
SMCHD1-205ENST00000581383 NARSO43776 548 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 SEC24DO94855 1032 aaPredicted RBP6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 GSPT1P15170 499 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 VCAM1P19320 739 aa6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 ADKP55263 362 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 BPIFB4P59827 614 aa6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 RRP12Q5JTH9 1297 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 BTNL9Q6UXG8 535 aa6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 ANKRD53Q8N9V6 530 aa6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 GLB1L3Q8NCI6 653 aaPredicted RBP6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 PPP1R14CQ8TAE6 165 aa6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 RABGGTAQ92696 567 aa6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 NKD2Q969F2 451 aaPredicted RBP6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 CHFRQ96EP1 664 aa6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 CCDC136Q96JN2 1154 aa6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 INTUQ9ULD6 942 aa6.1□□□□□ -1.43
SMCHD1-205ENST00000581383 GOLGA6CA6NDK9 693 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms