RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ADCY6O43306 1168 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 PTPN7P35236 360 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 APBA1Q02410 837 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 EFEMP1Q12805 493 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 MRPL49Q13405 166 aaKnown RBP6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 ELAVL1Q15717 326 aaKnown RBP6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 SPATS1Q496A3 300 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 ODR4Q5SWX8 454 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 MFSD5Q6N075 450 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 PDZD4Q76G19 769 aaPredicted RBP6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 ELOA2Q8IYF1 753 aaPredicted RBP6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 PQLC1Q8N2U9 271 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 OR7D4Q8NG98 312 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 HOOK2Q96ED9 719 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 ADOQ96SZ5 270 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 KLC2Q9H0B6 622 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 BCO1Q9HAY6 547 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 JAG2Q9Y219 1238 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 ZMYM3Q14202 1370 aa6.04□□□□□ -1.44
SMCHD1-204ENST00000581226 FAM171A2A8MVW0 826 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 CAPN14A8MX76 684 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 MFAP3LO75121 409 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 ENDOD1O94919 500 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 GNAT2P19087 354 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 HIBADHP31937 336 aaKnown RBP6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 SELENOPP49908 381 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 SEPT2Q15019 361 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 UAP1L1Q3KQV9 507 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 PRAMEF14Q5SWL7 426 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 MAMDC4Q6UXC1 1216 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 PRRT2Q7Z6L0 340 aaPredicted RBP6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 ANKRD35Q8N283 1001 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 CPA6Q8N4T0 437 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 ZNF808Q8N4W9 903 aaPredicted RBP6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 REPS2Q8NFH8 660 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 OR2I1PQ8NGU4 316 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 HOXB13Q92826 284 aaPredicted RBP6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 EDAQ92838 391 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 DVL3Q92997 716 aaPredicted RBP6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 BORCS6Q96GS4 357 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 C7orf25Q9BPX7 421 aa6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 HECAQ9UBI9 543 aaPredicted RBP6.03□□□□□ -1.44
SMCHD1-204ENST00000581226 S100BP04271 92 aaPredicted RBP6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 SREBF1P36956 1147 aa6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 WASP42768 502 aa6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 ADKP55263 362 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 MCL1Q07820 350 aa6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 SPTY2D1Q68D10 685 aaPredicted RBP6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 FAM83AQ86UY5 434 aa6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 PALM2Q8IXS6 379 aa6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 GSPT2Q8IYD1 628 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 TRMT2AQ8IZ69 625 aaKnown RBP6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 MIER2Q8N344 545 aa6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 FBXO18Q8NFZ0 1043 aa6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 COA7Q96BR5 231 aa6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 MIEF2Q96C03 454 aa6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 CPPED1Q9BRF8 314 aaPredicted RBP6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 SENP6Q9GZR1 1112 aaPredicted RBP6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 IP6K2Q9UHH9 426 aa6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 HDAC5Q9UQL6 1122 aa6.02□□□□□ -1.45
SMCHD1-204ENST00000581226 MUSKO15146 869 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 IPO13O94829 963 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 IL33O95760 270 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 HSP90B1P14625 803 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 SLC6A9P48067 706 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 EPHB1P54762 984 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 ADAM17P78536 824 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 PRKD1Q15139 912 aaPredicted RBP6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 TMEM240Q5SV17 173 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 MIGA2Q7L4E1 593 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 APBB1IPQ7Z5R6 666 aaPredicted RBP6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 XYLT1Q86Y38 959 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 RHOT1Q8IXI2 618 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 CMTR2Q8IYT2 770 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 MB21D1Q8N884 522 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 CCHCR1Q8TD31 782 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 STON2Q8WXE9 905 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 ST8SIA2Q92186 375 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 HDAC10Q969S8 669 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 CEP95Q96GE4 821 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 CDK5RAP1Q96SZ6 601 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 PDCD2LQ9BRP1 358 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 CSRNP2Q9H175 543 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 LDAHQ9H6V9 325 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 MANSC1Q9H8J5 431 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 LANCL2Q9NS86 450 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 LIMCH1Q9UPQ0 1083 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 SIK3Q9Y2K2 1263 aa6.01□□□□□ -1.45
SMCHD1-204ENST00000581226 CCDC154A6NI56 674 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 CYP27B1O15528 508 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 HTRA2O43464 458 aaPredicted RBP6□□□□□ -1.45
SMCHD1-204ENST00000581226 ZRANB2O95218 330 aaKnown RBP eCLIP6□□□□□ -1.45
SMCHD1-204ENST00000581226 CT47B1P0C2W7 299 aaPredicted RBP6□□□□□ -1.45
SMCHD1-204ENST00000581226 ZNF20P17024 532 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 RAB27AP51159 221 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 FAM47AQ5JRC9 791 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 MFSD14BQ5SR56 506 aa6□□□□□ -1.45
SMCHD1-204ENST00000581226 ATXN2LQ8WWM7 1075 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms