RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 SMYD4Q8IYR2 804 aaPredicted RBP16.53■□□□□ 0.24
MKS1-210ENST00000581180 GUF1Q8N442 669 aaKnown RBP16.53■□□□□ 0.24
MKS1-210ENST00000581180 GTPBP4Q9BZE4 634 aaKnown RBP16.53■□□□□ 0.24
MKS1-210ENST00000581180 KCTD10Q9H3F6 313 aa16.53■□□□□ 0.24
MKS1-210ENST00000581180 TMEM63CQ9P1W3 806 aa16.53■□□□□ 0.24
MKS1-210ENST00000581180 KIAA1671Q9BY89 1806 aa16.53■□□□□ 0.24
MKS1-210ENST00000581180 NLRC5Q86WI3 1866 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 A0A0B4J269 797 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 MEIS3P2A8K0S8 358 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 CLDN3O15551 220 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 FAM189A1O60320 539 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 GJB5O95377 273 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 HTRA4P83105 476 aaPredicted RBP16.52■□□□□ 0.24
MKS1-210ENST00000581180 NOLC1Q14978 699 aaKnown RBP eCLIP16.52■□□□□ 0.24
MKS1-210ENST00000581180 NFKBIBQ15653 356 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 KNOP1Q1ED39 458 aaKnown RBP16.52■□□□□ 0.24
MKS1-210ENST00000581180 CCDC183Q5T5S1 534 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 ISM2Q6H9L7 571 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 AGMOQ6ZNB7 445 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 ZBTB33Q86T24 672 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 SYCP3Q8IZU3 236 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 CEP120Q8N960 986 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 TRIML1Q8N9V2 468 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 LPPQ93052 612 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 TCHPQ9BT92 498 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 TRIM6Q9C030 488 aaPredicted RBP16.52■□□□□ 0.24
MKS1-210ENST00000581180 GBP3Q9H0R5 595 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 NXF3Q9H4D5 531 aaKnown RBP16.52■□□□□ 0.24
MKS1-210ENST00000581180 RC3H2Q9HBD1 1191 aaKnown RBP16.52■□□□□ 0.24
MKS1-210ENST00000581180 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
MKS1-210ENST00000581180 ANKFY1Q9P2R3 1169 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 HES2Q9Y543 173 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 PCDHB7Q9Y5E2 793 aa16.52■□□□□ 0.24
MKS1-210ENST00000581180 GRXCR1A8MXD5 290 aa16.51■□□□□ 0.23
MKS1-210ENST00000581180 BIN1O00499 593 aa16.51■□□□□ 0.23
MKS1-210ENST00000581180 DGKIO75912 1065 aa16.51■□□□□ 0.23
MKS1-210ENST00000581180 UPP2O95045 317 aa16.51■□□□□ 0.23
MKS1-210ENST00000581180 GARTP22102 1010 aa16.51■□□□□ 0.23
MKS1-210ENST00000581180 PRCPP42785 496 aa16.51■□□□□ 0.23
MKS1-210ENST00000581180 SNRPFP62306 86 aaKnown RBP16.51■□□□□ 0.23
MKS1-210ENST00000581180 CLLU1OSQ5K130 101 aa16.51■□□□□ 0.23
MKS1-210ENST00000581180 SLFN12LQ6IEE8 588 aa16.51■□□□□ 0.23
MKS1-210ENST00000581180 APBB1IPQ7Z5R6 666 aaPredicted RBP16.51■□□□□ 0.23
MKS1-210ENST00000581180 ZNF689Q96CS4 500 aaPredicted RBP16.51■□□□□ 0.23
MKS1-210ENST00000581180 PGBD4Q96DM1 585 aa16.51■□□□□ 0.23
MKS1-210ENST00000581180 LRFN2Q9ULH4 789 aa16.51■□□□□ 0.23
MKS1-210ENST00000581180 MAPK8IP1Q9UQF2 711 aa16.51■□□□□ 0.23
MKS1-210ENST00000581180 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.5■□□□□ 0.23
MKS1-210ENST00000581180 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.5■□□□□ 0.23
MKS1-210ENST00000581180 KIF20AO95235 890 aa16.5■□□□□ 0.23
MKS1-210ENST00000581180 ITGA4P13612 1032 aa16.5■□□□□ 0.23
MKS1-210ENST00000581180 CD44P16070 742 aaKnown RBP16.5■□□□□ 0.23
MKS1-210ENST00000581180 IBSPP21815 317 aaPredicted RBP16.5■□□□□ 0.23
MKS1-210ENST00000581180 GRM5P41594 1212 aa16.5■□□□□ 0.23
MKS1-210ENST00000581180 FAM117BQ6P1L5 589 aa16.5■□□□□ 0.23
MKS1-210ENST00000581180 TMEM192Q8IY95 271 aa16.5■□□□□ 0.23
MKS1-210ENST00000581180 ADSSL1Q8N142 457 aa16.5■□□□□ 0.23
MKS1-210ENST00000581180 CBWD1Q9BRT8 395 aa16.5■□□□□ 0.23
MKS1-210ENST00000581180 AGPAT3Q9NRZ7 376 aa16.5■□□□□ 0.23
MKS1-210ENST00000581180 TYW1Q9NV66 732 aaKnown RBP16.5■□□□□ 0.23
MKS1-210ENST00000581180 SNTG2Q9NY99 539 aa16.5■□□□□ 0.23
MKS1-210ENST00000581180 CGNQ9P2M7 1197 aaKnown RBP16.5■□□□□ 0.23
MKS1-210ENST00000581180 LAMA2P24043 3122 aaKnown RBP16.5■□□□□ 0.23
MKS1-210ENST00000581180 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
MKS1-210ENST00000581180 PPP1R3GB7ZBB8 358 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 PDXKO00764 312 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 OGTO15294 1046 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 INPPL1O15357 1258 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 MEFVO15553 781 aaPredicted RBP16.49■□□□□ 0.23
MKS1-210ENST00000581180 OFD1O75665 1012 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 FGFR1P11362 822 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 HARSP12081 509 aaKnown RBP16.49■□□□□ 0.23
MKS1-210ENST00000581180 AKAP5P24588 427 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 GATMP50440 423 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 LRIT3Q3SXY7 679 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 ZBTB41Q5SVQ8 909 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
MKS1-210ENST00000581180 C12orf56Q8IXR9 622 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 THNSL1Q8IYQ7 743 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 HACE1Q8IYU2 909 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 RNF169Q8NCN4 708 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 ZSWIM2Q8NEG5 633 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 TMEM174Q8WUU8 243 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 POMGNT1Q8WZA1 660 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 MSTO1Q9BUK6 570 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 APOL6Q9BWW8 343 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 SEMA6BQ9H3T3 888 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 RSAD1Q9HA92 442 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 AGO2Q9UKV8 859 aaKnown RBP16.49■□□□□ 0.23
MKS1-210ENST00000581180 TRAF3IP3Q9Y228 551 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 GIT1Q9Y2X7 761 aa16.49■□□□□ 0.23
MKS1-210ENST00000581180 CLIC2O15247 247 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 HOXA2O43364 376 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 RECQL4O94761 1208 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 MATR3P43243 847 aaKnown RBP eCLIP16.48■□□□□ 0.23
MKS1-210ENST00000581180 RABGGTBP53611 331 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 KYAT1Q16773 422 aa16.48■□□□□ 0.23
MKS1-210ENST00000581180 SKOR2Q2VWA4 1001 aaPredicted RBP16.48■□□□□ 0.23
MKS1-210ENST00000581180 ZCWPW2Q504Y3 356 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms