RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 HMGB1P1B2RPK0 211 aaPredicted RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 AGPSO00116 658 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 SRGAP2O75044 1071 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 TSPY3P0CV98 308 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 TSPY8P0CW00 308 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 HIBADHP31937 336 aaKnown RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 EIF4A3P38919 411 aaKnown RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 CDR1P51861 262 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 GTF2A1P52655 376 aaPredicted RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 PMS1P54277 932 aaKnown RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 NAPAP54920 295 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 DYNLL1P63167 89 aaKnown RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 GNGT1P63211 74 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 TFAP4Q01664 338 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 ZNF211Q13398 564 aaPredicted RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 DRP2Q13474 957 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 CUL1Q13616 776 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 PDIA5Q14554 519 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 CLUL1Q15846 466 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 TXNRD1Q16881 649 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 INF2Q27J81 1249 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 RPS26P11Q5JNZ5 115 aaPredicted RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 FAM47AQ5JRC9 791 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 SLC10A5Q5PT55 438 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 CFAP58Q5T655 872 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 C12orf60Q5U649 245 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 SFMBT2Q5VUG0 894 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 KRT79Q5XKE5 535 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 PDXDC1Q6P996 788 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 LRIG3Q6UXM1 1119 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 ARMC9Q7Z3E5 817 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 RPAINQ86UA6 219 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 FMNL3Q8IVF7 1028 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 ZNF444Q8N0Y2 327 aaPredicted RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 REXO1Q8N1G1 1221 aaKnown RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 WDR66Q8TBY9 1149 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 BCAS4Q8TDM0 211 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 BCL7CQ8WUZ0 217 aaPredicted RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 FAM84BQ96KN1 310 aaPredicted RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 CITED4Q96RK1 184 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 TCF12Q99081 682 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 NT5C3AQ9H0P0 336 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 GLT8D2Q9H1C3 349 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 MKNK2Q9HBH9 465 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 MCM9Q9NXL9 1143 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 BTG4Q9NY30 223 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 ARHGAP20Q9P2F6 1191 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 MAD2L2Q9UI95 211 aa5.81□□□□□ -1.48
CDH8-206ENST00000580044 BZW2Q9Y6E2 419 aaKnown RBP5.81□□□□□ -1.48
CDH8-206ENST00000580044 PLIN4Q96Q06 1357 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 COL4A1P02462 1669 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 CYP2D7A0A087X1C5 515 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 RASSF10A6NK89 507 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 LRRC53A6NM62 1247 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 CCDC188H7C350 402 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 CCNT1O60563 726 aaKnown RBP5.8□□□□□ -1.48
CDH8-206ENST00000580044 TFRCP02786 760 aaKnown RBP5.8□□□□□ -1.48
CDH8-206ENST00000580044 GCFC2P16383 781 aaKnown RBP5.8□□□□□ -1.48
CDH8-206ENST00000580044 GUCY2CP25092 1073 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 CCT5P48643 541 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 FKBP3Q00688 224 aaKnown RBP5.8□□□□□ -1.48
CDH8-206ENST00000580044 ID3Q02535 119 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 STK4Q13043 487 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 BIRC3Q13489 604 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 CALCRLQ16602 461 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 LETM2Q2VYF4 491 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 ZNF792Q3KQV3 632 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 ASPRV1Q53RT3 343 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 SPDYCQ5MJ68 293 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 HAUS3Q68CZ6 603 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 MCTP2Q6DN12 878 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 RUFY4Q6ZNE9 571 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 CCDC91Q7Z6B0 441 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 ATG4DQ86TL0 474 aaPredicted RBP5.8□□□□□ -1.48
CDH8-206ENST00000580044 TAX1BP1Q86VP1 789 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 SHISA5Q8N114 240 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 LARP4BQ92615 738 aaKnown RBP5.8□□□□□ -1.48
CDH8-206ENST00000580044 TAF4BQ92750 862 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 P3H4Q92791 437 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 LRRC45Q96CN5 670 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 PBKQ96KB5 322 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 LRRC1Q9BTT6 524 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 NRSN2Q9GZP1 204 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 TMEM60Q9H2L4 133 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 ZNF576Q9H609 170 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 MMRN2Q9H8L6 949 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 RC3H2Q9HBD1 1191 aaKnown RBP5.8□□□□□ -1.48
CDH8-206ENST00000580044 GDF3Q9NR23 364 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 IL17RBQ9NRM6 502 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 GEMIN8Q9NWZ8 242 aaKnown RBP5.8□□□□□ -1.48
CDH8-206ENST00000580044 VAV3Q9UKW4 847 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 MINPP1Q9UNW1 487 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 DAAM1Q9Y4D1 1078 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 PCDHGC5Q9Y5F6 944 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 COL4A3BPQ9Y5P4 624 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 CAPN6Q9Y6Q1 641 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 FAM169AQ9Y6X4 670 aa5.8□□□□□ -1.48
CDH8-206ENST00000580044 ARID1BQ8NFD5 2236 aaPredicted RBP5.8□□□□□ -1.48
CDH8-206ENST00000580044 QSER1Q2KHR3 1735 aa5.79□□□□□ -1.48
CDH8-206ENST00000580044 GRIN2DO15399 1336 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms