RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TTMPQ5BVD1 217 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 XKR3Q5GH77 459 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DCAF12L1Q5VU92 463 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SWSAP1Q6NVH7 229 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ABHD15Q6UXT9 468 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 NOP9Q86U38 636 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PPM1KQ8N3J5 372 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 C1orf131Q8NDD1 294 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 FBXL13Q8NEE6 735 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 HELQQ8TDG4 1101 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PIK3R5Q8WYR1 880 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 POMGNT1Q8WZA1 660 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 KCNN1Q92952 543 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ARL8AQ96BM9 186 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 FAM81BQ96LP2 452 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 RNPC3Q96LT9 517 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 MTFR1LQ9H019 292 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 POLR3FQ9H1D9 316 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 A1CFQ9NQ94 594 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CYP26B1Q9NR63 512 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CYP39A1Q9NYL5 469 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 KCNG1Q9UIX4 513 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 COG5Q9UP83 839 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 BCS1LQ9Y276 419 aa10.07□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SSC5DA1L4H1 1573 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SIP14410 1827 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 GOLGA6L10A0A0M3HER8 536 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SPDYE16A6NNV3 312 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 A6NNZ2 444 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TMEM110-MUSTN1A8MSY1 372 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 KIAA0391O15091 583 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CYP26A1O43174 497 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ZC3H11AO75152 810 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 GGPS1O95749 300 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 FGGP02679 453 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CYP1A2P05177 515 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SCP2P22307 547 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CTNNA2P26232 953 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ICAM3P32942 547 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PDE6CP51160 858 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PTENP60484 403 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 FMO1Q01740 532 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CDR2Q01850 454 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 MTMR3Q13615 1198 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TRADDQ15628 312 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TUBB8Q3ZCM7 444 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 BRDTQ58F21 947 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SH3D19Q5HYK7 790 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ENOSF1Q7L5Y1 443 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TRMT1LQ7Z2T5 733 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CCDC60Q8IWA6 550 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 UBL4BQ8N7F7 174 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CHST13Q8NET6 341 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TAS1R2Q8TE23 839 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SEC14L1Q92503 715 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CCDC127Q96BQ5 260 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 KLRG1Q96E93 195 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ZSWIM1Q9BR11 485 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 RAB17Q9H0T7 212 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 WNT8AQ9H1J5 351 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 KIAA1586Q9HCI6 787 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TOPORSQ9NS56 1045 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 RAB20Q9NX57 234 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ARHGAP28Q9P2N2 729 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PLAAQ9Y263 795 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CD2APQ9Y5K6 639 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ALG6Q9Y672 507 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ADGRA3Q8IWK6 1321 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SYNGAP1Q96PV0 1343 aa10.06□□□□□ -0.8
CDK5RAP3-208ENST00000578525 LCTP09848 1927 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 WDR81Q562E7 1941 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 A0A0G2JMZ2 1700 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ZNF233A6NK53 670 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 HNRNPDLO14979 420 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TTI1O43156 1089 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 EXTL3O43909 919 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PHF2O75151 1096 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PPFIA4O75335 1185 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 MMEP08473 750 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CYP11B1P15538 503 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 LIG4P49917 911 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SOX10P56693 466 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PRPF4BQ13523 1007 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DHX34Q14147 1143 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 EMC2Q15006 297 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PSMD6Q15008 389 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 MTERF2Q49AM1 385 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SEL1L2Q5TEA6 688 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ACAD10Q6JQN1 1059 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 KDM7AQ6ZMT4 941 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TAS1R3Q7RTX0 852 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DDX42Q86XP3 938 aaKnown RBP eCLIP10.05□□□□□ -0.81e-11■□□□□ 8.7
CDK5RAP3-208ENST00000578525 EFCAB13Q8IY85 973 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DNERQ8NFT8 737 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TRPM4Q8TD43 1214 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ALG3Q92685 438 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ZNF653Q96CK0 615 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 BICD1Q96G01 975 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms