RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 CCDC155Q8N6L0 562 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 ZNF668Q96K58 619 aaPredicted RBP14.63□□□□□ -0.07
SRSF1-202ENST00000578430 OSMRQ99650 979 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 TCHPQ9BT92 498 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 MSTO1Q9BUK6 570 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 NDST4Q9H3R1 872 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 PTPRHQ9HD43 1115 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 SQORQ9Y6N5 450 aa14.63□□□□□ -0.07
SRSF1-202ENST00000578430 A0A1W2PQC6 194 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 GOLGA6L6A8MZA4 724 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 ABLIM1O14639 778 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 OGTO15294 1046 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 STX10O60499 249 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 TSPAN1O60635 241 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 MYCP01106 439 aaPredicted RBP14.62□□□□□ -0.07
SRSF1-202ENST00000578430 EDN1P05305 212 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 IQCF3P0C7M6 154 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 MCF2P10911 925 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 RBL2Q08999 1139 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 TMEM62Q0P6H9 643 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 BFSP1Q12934 665 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 NOLC1Q14978 699 aaKnown RBP eCLIP14.62□□□□□ -0.07
SRSF1-202ENST00000578430 SNRNP35Q16560 246 aaKnown RBP14.62□□□□□ -0.07
SRSF1-202ENST00000578430 TRIM71Q2Q1W2 868 aaKnown RBP14.62□□□□□ -0.07
SRSF1-202ENST00000578430 MIIPQ5JXC2 388 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 CATSPER4Q7RTX7 472 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 USP38Q8NB14 1042 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 TMC2Q8TDI7 906 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 CCDC51Q96ER9 411 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 MFSD14AQ96MC6 490 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 PPP1R16BQ96T49 567 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 ADPGKQ9BRR6 497 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 SENP6Q9GZR1 1112 aaPredicted RBP14.62□□□□□ -0.07
SRSF1-202ENST00000578430 CDHR5Q9HBB8 845 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 INTS13Q9NVM9 706 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 ANKFY1Q9P2R3 1169 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 IMPACTQ9P2X3 320 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 CDY2AQ9Y6F7 541 aa14.62□□□□□ -0.07
SRSF1-202ENST00000578430 A0A1B0GUA9 196 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 PES1O00541 588 aaKnown RBP14.61□□□□□ -0.07
SRSF1-202ENST00000578430 TLR3O15455 904 aaKnown RBP14.61□□□□□ -0.07
SRSF1-202ENST00000578430 AFPP02771 609 aaKnown RBP14.61□□□□□ -0.07
SRSF1-202ENST00000578430 ARF4P18085 180 aaPredicted RBP14.61□□□□□ -0.07
SRSF1-202ENST00000578430 EN2P19622 333 aaPredicted RBP14.61□□□□□ -0.07
SRSF1-202ENST00000578430 DEKP35659 375 aaKnown RBP14.61□□□□□ -0.07
SRSF1-202ENST00000578430 VAMP7P51809 220 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 UBXN1Q04323 297 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 MGAT3Q09327 533 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 DCAF4L1Q3SXM0 396 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 ZNF568Q3ZCX4 644 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 HABP4Q5JVS0 413 aaKnown RBP14.61□□□□□ -0.07
SRSF1-202ENST00000578430 C1orf53Q5VUE5 145 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 NOTUMQ6P988 496 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 VSTM4Q8IW00 320 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 DRC7Q8IY82 874 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 CAGE1Q8TC20 777 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 IQCDQ96DY2 449 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 ZBTB45Q96K62 511 aaPredicted RBP14.61□□□□□ -0.07
SRSF1-202ENST00000578430 ERGIC2Q96RQ1 377 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 FAM213AQ9BRX8 229 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 TMEM106CQ9BVX2 250 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 TRMT13Q9NUP7 481 aaKnown RBP14.61□□□□□ -0.07
SRSF1-202ENST00000578430 GINS2Q9Y248 185 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 ITIH6Q6UXX5 1313 aa14.61□□□□□ -0.07
SRSF1-202ENST00000578430 GTPBP10A4D1E9 387 aaKnown RBP14.6□□□□□ -0.07
SRSF1-202ENST00000578430 TTLL13PA6NNM8 815 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 TEX33O43247 280 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 B4GALT5O43286 388 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 B4GALT4O60513 344 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 N4BP1O75113 896 aaKnown RBP14.6□□□□□ -0.07
SRSF1-202ENST00000578430 GTF2H1P32780 548 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 THPOP40225 353 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 PBX1P40424 430 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 CYP24A1Q07973 514 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 KCNH2Q12809 1159 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 BFSP2Q13515 415 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 SURF1Q15526 300 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 SPECC1LQ69YQ0 1117 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 FAM126BQ8IXS8 530 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 RDH13Q8NBN7 331 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 DHX38Q92620 1227 aaKnown RBP14.6□□□□□ -0.07
SRSF1-202ENST00000578430 SLC35C1Q96A29 364 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 SAAL1Q96ER3 474 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 HAPLN2Q9GZV7 340 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 CDT1Q9H211 546 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 PDZD7Q9H5P4 517 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 AGPAT5Q9NUQ2 364 aa14.6□□□□□ -0.07
SRSF1-202ENST00000578430 GOLGA8IPA6NC78 632 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 GOLGA8JA6NMD2 632 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 GPR182O15218 404 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 PMM2O15305 246 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 P4HA2O15460 535 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 FAM189A1O60320 539 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 CSDE1O75534 798 aaKnown RBP14.59□□□□□ -0.07
SRSF1-202ENST00000578430 RPS6KA5O75582 802 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 CD4P01730 458 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 CHRNA1P02708 482 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 CLTAP09496 248 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 COL6A1P12109 1028 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 HOXA11P31270 313 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms